RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 UBA6A0AVT1 1052 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-205ENST00000417664 H0YHG0 523 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 DLX3O60479 287 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 NPHS1O60500 1241 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 LYPLA1O75608 230 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-205ENST00000417664 SRP72O76094 671 aaKnown RBP16.74■□□□□ 0.27
SSBP3-205ENST00000417664 SLC4A1P02730 911 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 ZNF37AP17032 561 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-205ENST00000417664 CCNHP51946 323 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-205ENST00000417664 POLR2LP62875 67 aaKnown RBP16.74■□□□□ 0.27
SSBP3-205ENST00000417664 RCN2Q14257 317 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 CDKN3Q16667 212 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 ZRANB3Q5FWF4 1079 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 LYPLAL1Q5VWZ2 237 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 ZDHHC20Q5W0Z9 365 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 TMC5Q6UXY8 1006 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 TPRG1Q6ZUI0 275 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 KIRREL3Q8IZU9 778 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 RHEBL1Q8TAI7 183 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 STON2Q8WXE9 905 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 SMIM14Q96QK8 99 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 PBX4Q9BYU1 374 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 DNAJC28Q9NX36 388 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 GDE1Q9NZC3 331 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 ERVW-1Q9UQF0 538 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-205ENST00000417664 SLC27A6Q9Y2P4 619 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 RAP2CQ9Y3L5 183 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 CAPN7Q9Y6W3 813 aa16.74■□□□□ 0.27
SSBP3-205ENST00000417664 C1orf232A0A0U1RR37 186 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 SLCO1B7G3V0H7 640 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 RHOBTB1O94844 696 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 ESR1P03372 595 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 SRPRAP08240 638 aaKnown RBP16.73■□□□□ 0.27
SSBP3-205ENST00000417664 ALPIP09923 528 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 KITP10721 976 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 ADH5P11766 374 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 PKMP14618 531 aaKnown RBP16.73■□□□□ 0.27
SSBP3-205ENST00000417664 CTPS1P17812 591 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 NFKBIAP25963 317 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 SERPINB3P29508 390 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 HNF1BP35680 557 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 PGGT1BP53609 377 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 PRKAA1Q13131 559 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 EML3Q32P44 896 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 PPP2R2DQ66LE6 453 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 GRAMD4Q6IC98 578 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 PSAPL1Q6NUJ1 521 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 NAPRTQ6XQN6 538 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 PIANPQ8IYJ0 282 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 BPIFB1Q8TDL5 484 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 SMARCD2Q92925 531 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 EID2BQ96D98 161 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 CNDP1Q96KN2 507 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 MCCC1Q96RQ3 725 aaPredicted RBP16.73■□□□□ 0.27
SSBP3-205ENST00000417664 BPIFA1Q9NP55 256 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 MARCOQ9UEW3 520 aaPredicted RBP16.73■□□□□ 0.27
SSBP3-205ENST00000417664 APOBEC2Q9Y235 224 aaKnown RBP16.73■□□□□ 0.27
SSBP3-205ENST00000417664 PCDHB1Q9Y5F3 818 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 MYOFQ9NZM1 2061 aa16.73■□□□□ 0.27
SSBP3-205ENST00000417664 VPS26AO75436 327 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 IPO13O94829 963 aaKnown RBP16.72■□□□□ 0.27
SSBP3-205ENST00000417664 NFATC1O95644 943 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 CYP17A1P05093 508 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 FSHRP23945 695 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 PBX2P40425 430 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 DGKGP49619 791 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 NAGLUP54802 743 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 ATP6V0D1P61421 351 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 NCALDP61601 193 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 TIAL1Q01085 375 aaKnown RBP eCLIP16.72■□□□□ 0.273e-6■■■■□ 20.6
SSBP3-205ENST00000417664 KRT72Q14CN4 511 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 TBCCQ15814 346 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 PTPRNQ16849 979 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 GPR33Q49SQ1 333 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 UGT3A1Q6NUS8 523 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 BRAT1Q6PJG6 821 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 TMEM207Q6UWW9 146 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 DPY19L3Q6ZPD9 716 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 SNX20Q7Z614 316 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 NPAS3Q8IXF0 933 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 MICALL1Q8N3F8 863 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 NKAPQ8N5F7 415 aaKnown RBP16.72■□□□□ 0.27
SSBP3-205ENST00000417664 C12orf76Q8N812 135 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-205ENST00000417664 GRIN3AQ8TCU5 1115 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 ANKRD49Q8WVL7 239 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 KCNJ9Q92806 393 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 VOPP1Q96AW1 172 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 LRIG1Q96JA1 1093 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 ASB16Q96NS5 453 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 BIRC8Q96P09 236 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 DERL2Q9GZP9 239 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 ZMYND15Q9H091 742 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 CDH19Q9H159 772 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 TFB2MQ9H5Q4 396 aaKnown RBP16.72■□□□□ 0.27
SSBP3-205ENST00000417664 TRPV4Q9HBA0 871 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 SLCO3A1Q9UIG8 710 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 OAS3Q9Y6K5 1087 aaKnown RBP16.72■□□□□ 0.27
SSBP3-205ENST00000417664 CD1DP15813 335 aa16.72■□□□□ 0.27
SSBP3-205ENST00000417664 TFEBP19484 476 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms