RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 ZNF765Q7L2R6 523 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 B3GNT8Q7Z7M8 397 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 CNGA4Q8IV77 575 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 Q8N9G6 341 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-210ENST00000416778 WDR36Q8NI36 951 aaKnown RBP17.81■□□□□ 0.44
CPNE1-210ENST00000416778 RNF25Q96BH1 459 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-210ENST00000416778 BBC3Q96PG8 261 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-210ENST00000416778 GFM1Q96RP9 751 aaKnown RBP17.81■□□□□ 0.44
CPNE1-210ENST00000416778 WDR24Q96S15 920 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 HAUS2Q9NVX0 235 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 TMEM98Q9Y2Y6 226 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 TTLL3Q9Y4R7 772 aa17.81■□□□□ 0.44
CPNE1-210ENST00000416778 COL27A1Q8IZC6 1860 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-210ENST00000416778 SHROOM3Q8TF72 1996 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 PTPRQQ9UMZ3 2332 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 GOLGA6CA6NDK9 693 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 GOLGA6BA6NDN3 693 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 CAPN8A6NHC0 703 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 TMX2-CTNND1H3BSU7 103 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 B4GAT1O43505 415 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 NUDT21O43809 227 aaKnown RBP17.8■□□□□ 0.44
CPNE1-210ENST00000416778 RPLP0P05388 317 aaKnown RBP17.8■□□□□ 0.44
CPNE1-210ENST00000416778 GOLGA6DP0CG33 693 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 AK4P27144 223 aaPredicted RBP17.8■□□□□ 0.44
CPNE1-210ENST00000416778 ADCY8P40145 1251 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 CD86P42081 329 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 GNPDA1P46926 289 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 PCBP4P57723 403 aaKnown RBP17.8■□□□□ 0.44
CPNE1-210ENST00000416778 B4GALNT1Q00973 533 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 CTBSQ01459 385 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 ZBTB17Q13105 803 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 SARM1Q6SZW1 724 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 NPNTQ6UXI9 565 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 TC2NQ8N9U0 490 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 RIOK2Q9BVS4 552 aaKnown RBP17.8■□□□□ 0.44
CPNE1-210ENST00000416778 GSDMCQ9BYG8 508 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 THSD1Q9NS62 852 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 GOLGA6AQ9NYA3 693 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 TAAR2Q9P1P5 351 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 CNOT6Q9ULM6 557 aaKnown RBP17.8■□□□□ 0.44
CPNE1-210ENST00000416778 SSUH2Q9Y2M2 353 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 PLEKHM1Q9Y4G2 1056 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 HYOU1Q9Y4L1 999 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 SMG1Q96Q15 3661 aaKnown RBP17.8■□□□□ 0.44
CPNE1-210ENST00000416778 LRP4O75096 1905 aa17.8■□□□□ 0.44
CPNE1-210ENST00000416778 CCDC187A0A096LP49 1063 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 CDRT15L2A8MXV6 281 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 B4DGG1 531 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 APOL1O14791 398 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 ZFXP17010 805 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-210ENST00000416778 COMTP21964 271 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 CA4P22748 312 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 MAGEA1P43355 309 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 ZFP36L1Q07352 338 aaKnown RBP17.79■□□□□ 0.44
CPNE1-210ENST00000416778 ILF3Q12906 894 aaKnown RBP eCLIP17.79■□□□□ 0.443e-7■■□□□ 12.3
CPNE1-210ENST00000416778 PDK1Q15118 436 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 TAZQ16635 292 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 MFSD7Q6UXD7 560 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 CCNJLQ8IV13 435 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 RHOT1Q8IXI2 618 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 ARL14Q8N4G2 192 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 LPCAT1Q8NF37 534 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 EXD1Q8NHP7 514 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 LIN37Q96GY3 246 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-210ENST00000416778 NAF1Q96HR8 494 aaKnown RBP17.79■□□□□ 0.44
CPNE1-210ENST00000416778 COX14Q96I36 57 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 ZNF830Q96NB3 372 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-210ENST00000416778 OLFM3Q96PB7 478 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 MLPHQ9BV36 600 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-210ENST00000416778 FOXP3Q9BZS1 431 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 SUDS3Q9H7L9 328 aaPredicted RBP17.79■□□□□ 0.44
CPNE1-210ENST00000416778 DDX56Q9NY93 547 aaKnown RBP17.79■□□□□ 0.44
CPNE1-210ENST00000416778 DNPEPQ9ULA0 475 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 ALG6Q9Y672 507 aa17.79■□□□□ 0.44
CPNE1-210ENST00000416778 MGAQ8IWI9 3026 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 D6RAR5 112 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 TNFSF15O95150 251 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 LCA5LO95447 670 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 PYGLP06737 847 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 HADHBP55084 474 aaKnown RBP17.78■□□□□ 0.44
CPNE1-210ENST00000416778 AP1B1Q10567 949 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 PYCR3Q53H96 274 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 FOXR1Q6PIV2 292 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 B4GALNT4Q76KP1 1039 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 SPRED1Q7Z699 444 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 KIAA1524Q8TCG1 905 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-210ENST00000416778 ZDHHC1Q8WTX9 485 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 TADA1Q96BN2 335 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 EID2BQ96D98 161 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 IMP4Q96G21 291 aaKnown RBP17.78■□□□□ 0.44
CPNE1-210ENST00000416778 TRIB3Q96RU7 358 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 DPH1Q9BZG8 443 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 BRD8Q9H0E9 1235 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 SYNDIG1Q9H7V2 258 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 ATXN7L1Q9ULK2 861 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-210ENST00000416778 UNC13CQ8NB66 2214 aa17.78■□□□□ 0.44
CPNE1-210ENST00000416778 RGSL1A5PLK6 1076 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 ECEL1O95672 775 aa17.77■□□□□ 0.44
CPNE1-210ENST00000416778 KRT1P04264 644 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms