RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 TARS2Q9BW92 718 aaKnown RBP3.09□□□□□ -1.91
APP-207ENST00000415997 BBS2Q9BXC9 721 aa3.09□□□□□ -1.91
APP-207ENST00000415997 STRADBQ9C0K7 418 aa3.09□□□□□ -1.91
APP-207ENST00000415997 ZMYND12Q9H0C1 365 aa3.09□□□□□ -1.91
APP-207ENST00000415997 POLR3FQ9H1D9 316 aaPredicted RBP3.09□□□□□ -1.91
APP-207ENST00000415997 RSPH9Q9H1X1 276 aaPredicted RBP3.09□□□□□ -1.91
APP-207ENST00000415997 C2orf40Q9H1Z8 148 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PABPC3Q9H361 631 aaKnown RBP3.09□□□□□ -1.91
APP-207ENST00000415997 TTC12Q9H892 705 aaPredicted RBP3.09□□□□□ -1.91
APP-207ENST00000415997 EPB41L5Q9HCM4 733 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PRSS16Q9NQE7 514 aa3.09□□□□□ -1.91
APP-207ENST00000415997 ASF1BQ9NVP2 202 aa3.09□□□□□ -1.91
APP-207ENST00000415997 SYBUQ9NX95 663 aa3.09□□□□□ -1.91
APP-207ENST00000415997 SIRPGQ9P1W8 387 aa3.09□□□□□ -1.91
APP-207ENST00000415997 WDR35Q9P2L0 1181 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PILRAQ9UKJ1 303 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PNMA8BQ9ULN7 279 aaPredicted RBP3.09□□□□□ -1.91
APP-207ENST00000415997 FZD4Q9ULV1 537 aa3.09□□□□□ -1.91
APP-207ENST00000415997 SCML1Q9UN30 329 aa3.09□□□□□ -1.91
APP-207ENST00000415997 TNFSF13BQ9Y275 285 aa3.09□□□□□ -1.91
APP-207ENST00000415997 NEU2Q9Y3R4 380 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PCDHGB6Q9Y5F9 930 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PCDHGA9Q9Y5G4 932 aaKnown RBP3.09□□□□□ -1.91
APP-207ENST00000415997 CSNK1G3Q9Y6M4 447 aa3.09□□□□□ -1.91
APP-207ENST00000415997 TRRAPQ9Y4A5 3859 aa3.09□□□□□ -1.91
APP-207ENST00000415997 PTPRJQ12913 1337 aa3.09□□□□□ -1.91
APP-207ENST00000415997 ANK3Q12955 4377 aaKnown RBP3.09□□□□□ -1.92
APP-207ENST00000415997 AKAP6Q13023 2319 aa3.08□□□□□ -1.92
APP-207ENST00000415997 TTC26A0AVF1 554 aa3.08□□□□□ -1.92
APP-207ENST00000415997 PIPSLA2A3N6 862 aa3.08□□□□□ -1.92
APP-207ENST00000415997 NEMP2A6NFY4 417 aa3.08□□□□□ -1.92
APP-207ENST00000415997 LRRIQ4A6NIV6 560 aa3.08□□□□□ -1.92
APP-207ENST00000415997 LRRC72A6NJI9 287 aa3.08□□□□□ -1.92
APP-207ENST00000415997 RNF212BA8MTL3 300 aa3.08□□□□□ -1.92
APP-207ENST00000415997 C19orf84I3L1E1 186 aa3.08□□□□□ -1.92
APP-207ENST00000415997 HIP1O00291 1037 aa3.08□□□□□ -1.92
APP-207ENST00000415997 PIRO00625 290 aa3.08□□□□□ -1.92
APP-207ENST00000415997 E2F3O00716 465 aa3.08□□□□□ -1.92
APP-207ENST00000415997 TPP1O14773 563 aa3.08□□□□□ -1.92
APP-207ENST00000415997 MSI1O43347 362 aaKnown RBP3.08□□□□□ -1.92
APP-207ENST00000415997 DKC1O60832 514 aaKnown RBP eCLIP3.08□□□□□ -1.92
APP-207ENST00000415997 F9P00740 461 aa3.08□□□□□ -1.92
APP-207ENST00000415997 DNTTP04053 509 aa3.08□□□□□ -1.92
APP-207ENST00000415997 ADRB2P07550 413 aa3.08□□□□□ -1.92
APP-207ENST00000415997 STSP08842 583 aa3.08□□□□□ -1.92
APP-207ENST00000415997 CLEC2LP0C7M8 214 aa3.08□□□□□ -1.92
APP-207ENST00000415997 MCF2P10911 925 aa3.08□□□□□ -1.92
APP-207ENST00000415997 NUDT1P36639 197 aa3.08□□□□□ -1.92
APP-207ENST00000415997 MAGEA11P43364 429 aa3.08□□□□□ -1.92
APP-207ENST00000415997 RECQLP46063 649 aaPredicted RBP3.08□□□□□ -1.92
APP-207ENST00000415997 RARRES1P49788 294 aa3.08□□□□□ -1.92
APP-207ENST00000415997 ADPRHP54922 357 aa3.08□□□□□ -1.92
APP-207ENST00000415997 NOP14P78316 857 aaKnown RBP3.08□□□□□ -1.92
APP-207ENST00000415997 TLE4Q04727 773 aa3.08□□□□□ -1.92
APP-207ENST00000415997 FOXM1Q08050 763 aa3.08□□□□□ -1.92
APP-207ENST00000415997 PDIA5Q14554 519 aa3.08□□□□□ -1.92
APP-207ENST00000415997 NFE2Q16621 373 aaPredicted RBP3.08□□□□□ -1.92
APP-207ENST00000415997 IMMTQ16891 758 aaKnown RBP3.08□□□□□ -1.92
APP-207ENST00000415997 TTC31Q49AM3 519 aaPredicted RBP3.08□□□□□ -1.92
APP-207ENST00000415997 PIK3R6Q5UE93 754 aa3.08□□□□□ -1.92
APP-207ENST00000415997 SNX30Q5VWJ9 437 aa3.08□□□□□ -1.92
APP-207ENST00000415997 ANKS6Q68DC2 871 aa3.08□□□□□ -1.92
APP-207ENST00000415997 ESRP1Q6NXG1 681 aaKnown RBP3.08□□□□□ -1.92
APP-207ENST00000415997 LINGO4Q6UY18 593 aa3.08□□□□□ -1.92
APP-207ENST00000415997 DSTYKQ6XUX3 929 aa3.08□□□□□ -1.92
APP-207ENST00000415997 PIK3AP1Q6ZUJ8 805 aa3.08□□□□□ -1.92
APP-207ENST00000415997 OTUD6AQ7L8S5 288 aa3.08□□□□□ -1.92
APP-207ENST00000415997 PLXDC1Q8IUK5 500 aa3.08□□□□□ -1.92
APP-207ENST00000415997 SLC35F3Q8IY50 421 aa3.08□□□□□ -1.92
APP-207ENST00000415997 DCP1BQ8IZD4 617 aaKnown RBP3.08□□□□□ -1.92
APP-207ENST00000415997 CACNA2D3Q8IZS8 1091 aa3.08□□□□□ -1.92
APP-207ENST00000415997 SLC22A18ASQ8N1D0 253 aa3.08□□□□□ -1.92
APP-207ENST00000415997 ST6GALNAC3Q8NDV1 305 aa3.08□□□□□ -1.92
APP-207ENST00000415997 OR10H5Q8NGA6 315 aa3.08□□□□□ -1.92
APP-207ENST00000415997 SORCS1Q8WY21 1168 aa3.08□□□□□ -1.92
APP-207ENST00000415997 LINC00476Q8WZB0 136 aa3.08□□□□□ -1.92
APP-207ENST00000415997 STARD8Q92502 1023 aa3.08□□□□□ -1.92
APP-207ENST00000415997 GOLGA1Q92805 767 aa3.08□□□□□ -1.92
APP-207ENST00000415997 NAT6Q93015 286 aa3.08□□□□□ -1.92
APP-207ENST00000415997 PNPLA2Q96AD5 504 aa3.08□□□□□ -1.92
APP-207ENST00000415997 FUBP3Q96I24 572 aaKnown RBP eCLIP3.08□□□□□ -1.92
APP-207ENST00000415997 C18orf12Q96KH6 178 aa3.08□□□□□ -1.92
APP-207ENST00000415997 COQ10AQ96MF6 247 aa3.08□□□□□ -1.92
APP-207ENST00000415997 ACO2Q99798 780 aaKnown RBP3.08□□□□□ -1.92
APP-207ENST00000415997 HSD17B14Q9BPX1 270 aa3.08□□□□□ -1.92
APP-207ENST00000415997 DDA1Q9BW61 102 aa3.08□□□□□ -1.92
APP-207ENST00000415997 MRPL4Q9BYD3 311 aaKnown RBP3.08□□□□□ -1.92
APP-207ENST00000415997 PITHD1Q9GZP4 211 aaPredicted RBP3.08□□□□□ -1.92
APP-207ENST00000415997 ENKD1Q9H0I2 346 aa3.08□□□□□ -1.92
APP-207ENST00000415997 NEUROG2Q9H2A3 272 aa3.08□□□□□ -1.92
APP-207ENST00000415997 ZSWIM4Q9H7M6 989 aa3.08□□□□□ -1.92
APP-207ENST00000415997 TRIM39Q9HCM9 518 aa3.08□□□□□ -1.92
APP-207ENST00000415997 ELOVL2Q9NXB9 296 aa3.08□□□□□ -1.92
APP-207ENST00000415997 PCDHA12Q9UN75 941 aa3.08□□□□□ -1.92
APP-207ENST00000415997 DMTF1Q9Y222 760 aa3.08□□□□□ -1.92
APP-207ENST00000415997 ZGRF1Q86YA3 2104 aa3.07□□□□□ -1.92
APP-207ENST00000415997 A0A0B4J269 797 aa3.07□□□□□ -1.92
APP-207ENST00000415997 LOC101059948A0A1B0GTJ6 334 aa3.07□□□□□ -1.92
APP-207ENST00000415997 GAGE12BA1L429 117 aa3.07□□□□□ -1.92
APP-207ENST00000415997 TARSL2A2RTX5 802 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms