RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 GPR149Q86SP6 731 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 ALYREFQ86V81 257 aaKnown RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 MIB1Q86YT6 1006 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 GALNT13Q8IUC8 556 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 FAM217AQ8IXS0 508 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 RAVER1Q8IY67 606 aaKnown RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 CLYBLQ8N0X4 340 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 PGAM4Q8N0Y7 254 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 ELMOD1Q8N336 334 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 FBXW8Q8N3Y1 598 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 TMEM151AQ8N4L1 468 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 C12orf76Q8N812 135 aaPredicted RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 DCAF4L2Q8NA75 395 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 PCYOX1LQ8NBM8 494 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 LEMD2Q8NC56 503 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 OR13J1Q8NGT2 312 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 KCTD4Q8WVF5 259 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 DNAJC9Q8WXX5 260 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 SUSD6Q92537 303 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 HLA-CQ95604 372 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 PDLIM5Q96HC4 596 aaKnown RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 NAF1Q96HR8 494 aaKnown RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 MAGEB10Q96LZ2 347 aaPredicted RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 NR1H4Q96RI1 486 aaPredicted RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 MIPEPQ99797 713 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 APOL2Q9BQE5 337 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 SLC25A23Q9BV35 468 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 ERVK-6Q9BXR3 956 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 MRPL1Q9BYD6 325 aaKnown RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 C12orf65Q9H3J6 166 aaKnown RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 Q9H521 79 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 MEAF6Q9HAF1 191 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 CD248Q9HCU0 757 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 SCUBE2Q9NQ36 999 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 C8orf4Q9NR00 106 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 RAD18Q9NS91 495 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 UBP1Q9NZI7 540 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 C6orf203Q9P0P8 240 aaPredicted RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 APPL1Q9UKG1 709 aa8.65□□□□□ -1.02
MECP2-204ENST00000415944 TNPO3Q9Y5L0 923 aaKnown RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 NUP210Q8TEM1 1887 aaPredicted RBP8.65□□□□□ -1.02
MECP2-204ENST00000415944 CHD5Q8TDI0 1954 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 HELZP42694 1942 aaKnown RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 J3KR12 359 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 IFRD1O00458 451 aaPredicted RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 CCL16O15467 120 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 ITM2AO43736 263 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 KERAO60938 352 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 NDUFS3O75489 264 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 HMGA1P17096 107 aaKnown RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 KCNA5P22460 613 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 RPS3P23396 243 aaKnown RBP eCLIP8.64□□□□□ -1.03
MECP2-204ENST00000415944 HOXD9P28356 352 aaPredicted RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 GABRB3P28472 473 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 CDC25CP30307 473 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 CPOXP36551 454 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 PTDSS1P48651 473 aaKnown RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 MTTPP55157 894 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 TRAP1Q12931 704 aaKnown RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 CTBP1Q13363 440 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 PDAP1Q13442 181 aaKnown RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 SMAD4Q13485 552 aaKnown RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 ART3Q13508 389 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 MAP7Q14244 749 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 TAF11Q15544 211 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 LEXMQ3ZCV2 418 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 GPR33Q49SQ1 333 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 ALFQ53S48 1182 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 SDHAF4Q5VUM1 108 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 TMC5Q6UXY8 1006 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 ARHGAP36Q6ZRI8 547 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 RINLQ6ZS11 566 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 RNF165Q6ZSG1 346 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 CHSY3Q70JA7 882 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 TFAP2DQ7Z6R9 452 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 MYLK4Q86YV6 388 aaPredicted RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 TREML1Q86YW5 311 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 TMC8Q8IU68 726 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 SLC41A1Q8IVJ1 513 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 PLPP6Q8IY26 295 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 FAM9CQ8IZT9 166 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 PLD6Q8N2A8 252 aaKnown RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 CBARPQ8N350 705 aaPredicted RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 ZNF781Q8N8C0 355 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 KDM1BQ8NB78 822 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 DTX3LQ8TDB6 740 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 LRRN4Q8WUT4 740 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 HEXDCQ8WVB3 486 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 SMG7Q92540 1137 aaKnown RBP8.64□□□□□ -1.03
MECP2-204ENST00000415944 KCNJ9Q92806 393 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 IGSF8Q969P0 613 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 HDAC10Q969S8 669 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 KIAA1191Q96A73 305 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 ROPN1LQ96C74 230 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 NXNL1Q96CM4 212 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 CDKN2AIPNLQ96HQ2 116 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 GCNAQ96QF7 691 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 TUBGCP5Q96RT8 1024 aa8.64□□□□□ -1.03
MECP2-204ENST00000415944 TRIM56Q9BRZ2 755 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms