RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 SORT1Q99523 831 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 RBBP8Q99708 897 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 SLC2A11Q9BYW1 496 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 NSUN3Q9H649 340 aaKnown RBP11.58□□□□□ -0.56
RFFL-205ENST00000415395 SCUBE2Q9NQ36 999 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 SPHK2Q9NRA0 654 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 SNX15Q9NRS6 342 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 ABCB8Q9NUT2 735 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 OBP2AQ9NY56 170 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 POMPQ9Y244 141 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 DTNAQ9Y4J8 743 aa11.58□□□□□ -0.56
RFFL-205ENST00000415395 EPOPA6NHQ4 379 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 SNAP91O60641 907 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 TRIM13O60858 407 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 NDST3O95803 873 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 GSRP00390 522 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 ATXN1LP0C7T5 689 aaKnown RBP11.57□□□□□ -0.56
RFFL-205ENST00000415395 TPH1P17752 444 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 ITGAXP20702 1163 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 MAPK8P45983 427 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 CSNK1DP48730 415 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 KLF10Q13118 480 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 HERC3Q15034 1050 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 CNPY1Q3B7I2 92 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 TMC5Q6UXY8 1006 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 GPR149Q86SP6 731 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 SLC25A41Q8N5S1 370 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 EFHBQ8N7U6 833 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 TTC16Q8NEE8 873 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 RP9Q8TA86 221 aaKnown RBP11.57□□□□□ -0.56
RFFL-205ENST00000415395 GABPB2Q8TAK5 448 aaPredicted RBP11.57□□□□□ -0.56
RFFL-205ENST00000415395 RIN3Q8TB24 985 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 ITFG1Q8TB96 612 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 PYDC1Q8WXC3 89 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 MFSD3Q96ES6 412 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 CNDP1Q96KN2 507 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 LRGUKQ96M69 825 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 ZSWIM3Q96MP5 696 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 ZNF778Q96MU6 729 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 FCRL3Q96P31 734 aaPredicted RBP11.57□□□□□ -0.56
RFFL-205ENST00000415395 TRIM56Q9BRZ2 755 aaKnown RBP11.57□□□□□ -0.56
RFFL-205ENST00000415395 ILKAPQ9H0C8 392 aaPredicted RBP11.57□□□□□ -0.56
RFFL-205ENST00000415395 EBF3Q9H4W6 596 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 CHRAC1Q9NRG0 131 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 PNPOQ9NVS9 261 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 PLK2Q9NYY3 685 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 GDE1Q9NZC3 331 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 THEGQ9P2T0 379 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 RIMKLBQ9ULI2 386 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 PSMD13Q9UNM6 376 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 KLHL33A6NCF5 533 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 ANKRD33BA6NCL7 494 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 PDLIM1O00151 329 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 VCLP18206 1134 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 FSHRP23945 695 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 SCNN1BP51168 640 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 AP1S1P61966 158 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 SULT2A1Q06520 285 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 ILF2Q12905 390 aaKnown RBP11.57□□□□□ -0.56
RFFL-205ENST00000415395 MSLNQ13421 630 aaPredicted RBP11.57□□□□□ -0.56
RFFL-205ENST00000415395 IHHQ14623 411 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 POU6F1Q14863 301 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 PDK3Q15120 406 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 ADRM1Q16186 407 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 GRAMD1BQ3KR37 738 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 SIRPB2Q5JXA9 342 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 SH2D4BQ5SQS7 431 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 KIAA0930Q6ICG6 404 aaPredicted RBP11.57□□□□□ -0.56
RFFL-205ENST00000415395 EP400NLQ6ZTU2 488 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 KCNMB4Q86W47 210 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 POU5F2Q8N7G0 328 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 ING5Q8WYH8 240 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 TRIB3Q96RU7 358 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 BBS2Q9BXC9 721 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 TRPV4Q9HBA0 871 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 TCF7L2Q9NQB0 619 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 TREX1Q9NSU2 369 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 TMEM216Q9P0N5 145 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 LHX3Q9UBR4 397 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 RAB26Q9ULW5 256 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 RAP2CQ9Y3L5 183 aa11.57□□□□□ -0.56
RFFL-205ENST00000415395 MYOFQ9NZM1 2061 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 RGSL1A5PLK6 1076 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 DENRO43583 198 aaKnown RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 DCXO43602 365 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 HOXB8P17481 243 aaPredicted RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 NMBRP28336 390 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 CHRNA4P43681 627 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 RGRP47804 291 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 POLD2P49005 469 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 KPNA2P52292 529 aaKnown RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 RHOAP61586 193 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 PRKAA1Q13131 559 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 PITRM1Q5JRX3 1037 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 OGFRL1Q5TC84 451 aaPredicted RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 FOXB2Q5VYV0 432 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 NCEH1Q6PIU2 408 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 BNC2Q6ZN30 1099 aaPredicted RBP11.56□□□□□ -0.56
RFFL-205ENST00000415395 STRA8Q7Z7C7 330 aa11.56□□□□□ -0.56
RFFL-205ENST00000415395 KBTBD6Q86V97 674 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms