RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 POLKQ9UBT6 870 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 CD207Q9UJ71 328 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZHX1Q9UKY1 873 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 DERAQ9Y315 318 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 CLDN16Q9Y5I7 305 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 YTHDC2Q9H6S0 1430 aaKnown RBP3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 PTPRMP28827 1452 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 KIF20BQ96Q89 1820 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 CACNA1FO60840 1977 aa3.83□□□□□ -1.8
HMGB3P23-201ENST00000414981 TUBGCP6Q96RT7 1819 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 ERCC6L2Q5T890 1561 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 MAP3K5Q99683 1374 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 TTC41PQ6P2S7 1318 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 CNTNAP2Q9UHC6 1331 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 C17orf100A8MU93 164 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 B4E171 279 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 FAM157AC9JC47 383 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 P4HA2O15460 535 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 LDB2O43679 373 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 STRNO43815 780 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 KIF5CO60282 957 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 SLU7O95391 586 aaKnown RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 TK1P04183 234 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 TUBBP07437 444 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 PRSS2P07478 247 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 CSF1P09603 554 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 AKR1B1P15121 316 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 NAGAP17050 411 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 SYT1P21579 422 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 U2AF2P26368 475 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 PSMA5P28066 241 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 RFC1P35251 1148 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 MTNR1AP48039 350 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 PAPOLAP51003 745 aaKnown RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 ACTR2P61160 394 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 TUBB2AQ13885 445 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 BYSLQ13895 437 aaKnown RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 PRKG1Q13976 671 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 SLMAPQ14BN4 828 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 POSTNQ15063 836 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 CCNG2Q16589 344 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 CTXN3Q4LDR2 81 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZNF484Q5JVG2 852 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 CCDC30Q5VVM6 783 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 TBC1D9BQ66K14 1250 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 CAPRIN2Q6IMN6 1127 aaKnown RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZSCAN25Q6NSZ9 544 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 IRGCQ6NXR0 463 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 C8orf82Q6P1X6 216 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 DENND1BQ6P3S1 775 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 C4orf50Q6ZRC1 276 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 C18orf65Q6ZTR6 163 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 MOGAT3Q86VF5 341 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 CLIP4Q8N3C7 705 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 MASTLQ96GX5 879 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 RBM18Q96H35 190 aaKnown RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 SEC62Q99442 399 aaKnown RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 POLR3CQ9BUI4 534 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 TUBB2BQ9BVA1 445 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZSCAN16Q9H4T2 348 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 CWC15Q9P013 229 aaKnown RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 CFAP45Q9UL16 551 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 ATP6V0A2Q9Y487 856 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 SRPRBQ9Y5M8 271 aaKnown RBP3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 EVPLQ92817 2033 aa3.82□□□□□ -1.8
HMGB3P23-201ENST00000414981 KIDINS220Q9ULH0 1771 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 KNDC1Q76NI1 1749 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 CAMSAP1Q5T5Y3 1602 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 MSH6P52701 1360 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 TTC21BQ7Z4L5 1316 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 TTC21AQ8NDW8 1320 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 C17orf113A0A1B0GUU1 675 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 ANKRD18BA2A2Z9 1011 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 TARSL2A2RTX5 802 aaKnown RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 GOLGA6L9A6NEM1 432 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 DDTLA6NHG4 134 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 DDX58O95786 925 aaKnown RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 TBX18O95935 607 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 ATP1A3P13637 1013 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 PLA2G2AP14555 144 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 H2AFXP16104 143 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 PAX7P23759 505 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 YWHAQP27348 245 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 HOXD10P28358 340 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 GPR12P47775 334 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 ZNF75DP51815 510 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 NUDT6P53370 316 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 SEC61A1P61619 476 aaKnown RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 TMED1Q13445 227 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 EFR3AQ14156 821 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 NFATC4Q14934 902 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 MEA1Q16626 185 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 TTC31Q49AM3 519 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 HSP90B2PQ58FF3 399 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 FAM205BPQ63HN1 556 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 NADSYN1Q6IA69 706 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 GJB7Q6PEY0 223 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 TMCO3Q6UWJ1 677 aa3.81□□□□□ -1.8
HMGB3P23-201ENST00000414981 MFSD6Q6ZSS7 791 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms