RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 DBHP09172 617 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 TCF4P15884 667 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PNLIPP16233 465 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 GLDCP23378 1020 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PSMA2P25787 234 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 AOAHP28039 575 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 GJC1P36383 396 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PTPN9P43378 593 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 HTR3AP46098 478 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 ZNF75DP51815 510 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 GSCP56915 257 aaPredicted RBP4.98□□□□□ -1.61
VPS41-205ENST00000414632 ALDH6A1Q02252 535 aaKnown RBP4.98□□□□□ -1.61
VPS41-205ENST00000414632 ROM1Q03395 351 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 MAMLD1Q13495 774 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 STARD3Q14849 445 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 CA9Q16790 459 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 BRMS1LQ5PSV4 323 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 ARTNQ5T4W7 220 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PRAMEF9Q5VWM5 478 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 RWDD4Q6NW29 188 aaKnown RBP4.98□□□□□ -1.61
VPS41-205ENST00000414632 PAQR3Q6TCH7 311 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 LRRC31Q6UY01 552 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 LEKR1Q6ZMV7 388 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 STRADAQ7RTN6 431 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 OVCH2Q7RTZ1 564 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 KANSL1Q7Z3B3 1105 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 TRMT11Q7Z4G4 463 aaKnown RBP4.98□□□□□ -1.61
VPS41-205ENST00000414632 FAM124AQ86V42 546 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 VPS36Q86VN1 386 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 WFDC3Q8IUB2 231 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 ZNF683Q8IZ20 524 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PRR18Q8N4B5 295 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 CAMKK1Q8N5S9 505 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS41-205ENST00000414632 SUMF1Q8NBK3 374 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 OR7D4Q8NG98 312 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 CCDC26Q8TAB7 109 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 FIBINQ8TAL6 211 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PPP1R35Q8TAP8 253 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 WFIKKN2Q8TEU8 576 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 TSPEARQ8WU66 669 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 UCMAQ8WVF2 138 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 GAB3Q8WWW8 586 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PGAP3Q96FM1 320 aaPredicted RBP4.98□□□□□ -1.61
VPS41-205ENST00000414632 LMLNQ96KR4 655 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PEBP4Q96S96 227 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 CHP1Q99653 195 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 GABRG3Q99928 467 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 NUP85Q9BW27 656 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 KRTAP4-8Q9BYQ9 185 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 THAP2Q9H0W7 228 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 DEF6Q9H4E7 631 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 ABHD10Q9NUJ1 306 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PARVAQ9NVD7 372 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 THAP10Q9P2Z0 257 aaPredicted RBP4.98□□□□□ -1.61
VPS41-205ENST00000414632 NCDNQ9UBB6 729 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PCSK1NQ9UHG2 260 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 DNAI1Q9UI46 699 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 SLCO3A1Q9UIG8 710 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 MBD1Q9UIS9 605 aaPredicted RBP4.98□□□□□ -1.61
VPS41-205ENST00000414632 GPR160Q9UJ42 338 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 VPS28Q9UK41 221 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 PHTF1Q9UMS5 762 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 ERVW-1Q9UQF0 538 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 ACTL7AQ9Y615 435 aa4.98□□□□□ -1.61
VPS41-205ENST00000414632 LRRK1Q38SD2 2015 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 TMEM191CA6NGB0 347 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 TMEM110-MUSTN1A8MSY1 372 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 AKR1B15C9JRZ8 316 aaPredicted RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 PROB1E7EW31 1015 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 K7ERQ8 282 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PLK4O00444 970 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SMAD6O43541 496 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 AKR1B10O60218 316 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SYNCRIPO60506 623 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 CLDN11O75508 207 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 TUSC2O75896 110 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 MOCS3O95396 460 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 PRLP01236 227 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 HPXP02790 462 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 HRGP04196 525 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ATP5BP06576 529 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 TPM1P09493 284 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 DLDP09622 509 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 GZMAP12544 262 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 FUT4P22083 530 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 MIPP30301 263 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 MC4RP32245 332 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ADRA1BP35368 520 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ACVRL1P37023 503 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SSR1P43307 286 aaKnown RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 DHPSP49366 369 aaPredicted RBP4.97□□□□□ -1.61
VPS41-205ENST00000414632 COPAP53621 1224 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 SLC16A1P53985 500 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 GALCP54803 685 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 CDH4P55283 916 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ST8SIA6P61647 398 aa4.97□□□□□ -1.61
VPS41-205ENST00000414632 ECT2LQ008S8 904 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms