RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ZNF180Q9UJW8 692 aa17.25■□□□□ 0.35
PHRF1-202ENST00000413872 TRAF6Q9Y4K3 522 aa17.25■□□□□ 0.35
PHRF1-202ENST00000413872 GRIN2DO15399 1336 aa17.25■□□□□ 0.35
PHRF1-202ENST00000413872 RNF225M0QZC1 329 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-202ENST00000413872 PDE5AO76074 875 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 PRAMEF1O95521 474 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 ATP6V1G2O95670 118 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 APLP1P51693 650 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 RFTN2Q52LD8 501 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-202ENST00000413872 CAMK1DQ8IU85 385 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 ZNF567Q8N184 647 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 YIPF1Q9Y548 306 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 H3BNH8 94 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 SASH3O75995 380 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 HNF4AP41235 474 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 FGD2Q7Z6J4 655 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 TEKT5Q96M29 485 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 FBXL18Q96ME1 805 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 PANX1Q96RD7 426 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 ZNF607Q96SK3 696 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 PNPLA8Q9NP80 782 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 SEMA3GQ9NS98 782 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 BTRCQ9Y297 605 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-202ENST00000413872 AOC2O75106 756 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 ERAL1O75616 437 aaKnown RBP17.24■□□□□ 0.35
PHRF1-202ENST00000413872 STK16O75716 305 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 VNN1O95497 513 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 BPGMP07738 259 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 TNK2Q07912 1038 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 FNBP1LQ5T0N5 605 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 LINGO4Q6UY18 593 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 MPP5Q8N3R9 675 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 LRRC57Q8N9N7 239 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 TTYH3Q9C0H2 523 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 CDH19Q9H159 772 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 UNC93B1Q9H1C4 597 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 RIBC2Q9H4K1 309 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 CERS4Q9HA82 394 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 BBIP1A8MTZ0 92 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 M0R2N6 131 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 TRIM38O00635 465 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 HSMCR30P0CW71 290 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 GPD2P43304 727 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 SNX30Q5VWJ9 437 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 MACC1Q6ZN28 852 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 NETO2Q8NC67 525 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 BRSK1Q8TDC3 778 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 SLITRK2Q9H156 845 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 POLR1BQ9H9Y6 1135 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 NEK6Q9HC98 313 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 UNGP13051 313 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-202ENST00000413872 ZNF24P17028 368 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 ASMTP46597 345 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 GPAT3Q53EU6 434 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 TSTD2Q5T7W7 516 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 DNAJB7Q7Z6W7 309 aaPredicted RBP17.24■□□□□ 0.35
PHRF1-202ENST00000413872 CMC1Q7Z7K0 106 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 C10orf107Q8IVU9 208 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 TNS4Q8IZW8 715 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 WDR36Q8NI36 951 aaKnown RBP17.24■□□□□ 0.35
PHRF1-202ENST00000413872 IGSF9Q9P2J2 1179 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 PCDHGB3Q9Y5G1 929 aa17.24■□□□□ 0.35
PHRF1-202ENST00000413872 CHRNB2P17787 502 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 OGNP20774 298 aaKnown RBP17.23■□□□□ 0.35
PHRF1-202ENST00000413872 SPIRE1Q08AE8 756 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 DPYSL2Q16555 572 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 RNFT2Q96EX2 444 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 CHD2O14647 1828 aaKnown RBP17.23■□□□□ 0.35
PHRF1-202ENST00000413872 RFXANKO14593 260 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 MYL12BO14950 172 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 SLC7A4O43246 635 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 ESR1P03372 595 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 WASP42768 502 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 SF1Q15637 639 aaKnown RBP17.23■□□□□ 0.35
PHRF1-202ENST00000413872 CLEC20AQ6ZU45 233 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 CUZD1Q86UP6 607 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 ZC3H7AQ8IWR0 971 aaKnown RBP17.23■□□□□ 0.35
PHRF1-202ENST00000413872 EXD2Q9NVH0 621 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 LRRC14BA6NHZ5 514 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 PKNOX1P55347 436 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 TTC23Q5W5X9 447 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 PWWP2AQ96N64 755 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 TNKS2Q9H2K2 1166 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 SGK2Q9HBY8 427 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 MIOSQ9NXC5 875 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 TNFAIP8O95379 198 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 ITGAXP20702 1163 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 PSMB9P28065 219 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 CDC42P60953 191 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 TOMM20Q15388 145 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 EIF3MQ7L2H7 374 aaKnown RBP17.23■□□□□ 0.35
PHRF1-202ENST00000413872 FBXO30Q8TB52 745 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 TBATAQ96M53 351 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 ERVK-5Q9HDB9 667 aa17.23■□□□□ 0.35
PHRF1-202ENST00000413872 WRAP73Q9P2S5 460 aaPredicted RBP17.23■□□□□ 0.35
PHRF1-202ENST00000413872 PTGER3P43115 390 aa17.22■□□□□ 0.35
PHRF1-202ENST00000413872 LIMK2P53671 638 aa17.22■□□□□ 0.35
PHRF1-202ENST00000413872 MFSD5Q6N075 450 aa17.22■□□□□ 0.35
PHRF1-202ENST00000413872 GCNT7Q6ZNI0 430 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms