RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 KIAA0930Q6ICG6 404 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 FAM9CQ8IZT9 166 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 FBXO39Q8N4B4 442 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 TSTD1Q8NFU3 115 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 SHKBP1Q8TBC3 707 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 WDR60Q8WVS4 1066 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 SIPA1Q96FS4 1042 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ASB2Q96Q27 587 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 NENFQ9UMX5 172 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 CITO14578 2027 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 TMEM247A6NEH6 219 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 FAM72CH0Y354 149 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 PSMA4P25789 261 aaKnown RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ABCE1P61221 599 aaKnown RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ZNF252P-AS1Q0IIN9 211 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 PLCL1Q15111 1095 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 N4BP2L1Q5TBK1 243 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 FAM72AQ5TYM5 149 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ANKS6Q68DC2 871 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 FAM72DQ6L9T8 149 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 PLEKHM3Q6ZWE6 761 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 FAM72BQ86X60 149 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ZNF641Q96N77 438 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-211ENST00000413186 ANKRD27Q96NW4 1050 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 CEP44Q9C0F1 390 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 SYNDIG1Q9H7V2 258 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 LRRC4CQ9HCJ2 640 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 PCDHGB4Q9UN71 923 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 IRAK3Q9Y616 596 aa8.52□□□□□ -1.05
SYNE1-211ENST00000413186 TRIM13O60858 407 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 ITGA2BP08514 1039 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 ZNF30P17039 623 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 EEF1B2P24534 225 aaKnown RBP8.51□□□□□ -1.05
SYNE1-211ENST00000413186 PLOD1Q02809 727 aaPredicted RBP8.51□□□□□ -1.05
SYNE1-211ENST00000413186 LMAN2Q12907 356 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 PUS10Q3MIT2 529 aaKnown RBP8.51□□□□□ -1.05
SYNE1-211ENST00000413186 GPR33Q49SQ1 333 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 FBXO43Q4G163 708 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 RUNDC3AQ59EK9 446 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 CEP78Q5JTW2 689 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 CEP68Q76N32 757 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 ADAMTSL2Q86TH1 951 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 PHYKPLQ8IUZ5 450 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 ZNF276Q8N554 614 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 CKAP2Q8WWK9 683 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 CLP1Q92989 425 aaKnown RBP8.51□□□□□ -1.05
SYNE1-211ENST00000413186 SLC46A2Q9BY10 475 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 CHRAC1Q9NRG0 131 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 HCFC1R1Q9NWW0 138 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 VWA7Q9Y334 891 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 MYH10P35580 1976 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 KLHL18O94889 574 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 SNUPNO95149 360 aaKnown RBP8.51□□□□□ -1.05
SYNE1-211ENST00000413186 GSRP00390 522 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 KRT16P08779 473 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 PKMP14618 531 aaKnown RBP8.51□□□□□ -1.05
SYNE1-211ENST00000413186 OGNP20774 298 aaKnown RBP8.51□□□□□ -1.05
SYNE1-211ENST00000413186 TIE1P35590 1138 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 VIPR2P41587 438 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 RAB10P61026 200 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 DMPKQ09013 629 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 C1orf146Q5VVC0 180 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 DPY19L2P1Q6NXN4 242 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 PACS1Q6VY07 963 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 FAM124AQ86V42 546 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 CAMK1DQ8IU85 385 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 TEX19Q8NA77 164 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 FGF13Q92913 245 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 FRMD6Q96NE9 622 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 FETUBQ9UGM5 382 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 OTOFQ9HC10 1997 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 BTN3A1O00481 513 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 TNFRSF10BO14763 440 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 HOXB2P14652 356 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 PGM1P36871 562 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 HSPA14Q0VDF9 509 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 DUSP6Q16828 381 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 SPDYAQ5MJ70 313 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 ANKRD22Q5VYY1 191 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 Q6ZVU0 165 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 GPSM1Q86YR5 675 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 HDDC3Q8N4P3 179 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 NAT8LQ8N9F0 302 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 NXPE3Q969Y0 559 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 ERLEC1Q96DZ1 483 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 SERAC1Q96JX3 654 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 YIPF3Q9GZM5 350 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 FBRSQ9HAH7 460 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 WASH4PA8MWX3 477 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 KAT7O95251 611 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 F11P03951 625 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 ANXA5P08758 320 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 CEBPBP17676 345 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 CASP2P42575 452 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 PSMD7P51665 324 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 PRKAA1Q13131 559 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 TUBB3Q13509 450 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 EFTUD2Q15029 972 aaKnown RBP eCLIP8.51□□□□□ -1.05
SYNE1-211ENST00000413186 CRY1Q16526 586 aa8.51□□□□□ -1.05
SYNE1-211ENST00000413186 C9orf50Q5SZB4 431 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms