RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 DCP2Q8IU60 420 aaKnown RBP13.9□□□□□ -0.18
CPNE1-206ENST00000412056 KLHL7Q8IXQ5 586 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 RAVER1Q8IY67 606 aaKnown RBP13.9□□□□□ -0.18
CPNE1-206ENST00000412056 GRK7Q8WTQ7 553 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 FUBP1Q96AE4 644 aaKnown RBP13.9□□□□□ -0.18
CPNE1-206ENST00000412056 LGR4Q9BXB1 951 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 FAM83DQ9H4H8 585 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 TRABDQ9H4I3 376 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 WDR26Q9H7D7 661 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 ERVMER34-1Q9H9K5 563 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 BPIFA1Q9NP55 256 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 TM7SF3Q9NS93 570 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 RNF14Q9UBS8 474 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 FEZ2Q9UHY8 353 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-206ENST00000412056 PNMA8BQ9ULN7 279 aaPredicted RBP13.9□□□□□ -0.18
CPNE1-206ENST00000412056 ARL5AQ9Y689 179 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 USP34Q70CQ2 3546 aa13.9□□□□□ -0.18
CPNE1-206ENST00000412056 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-206ENST00000412056 FADS2P1A8MWK0 482 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 SUN1O94901 812 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 ECEL1O95672 775 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 GAS8O95995 478 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 TPH1P17752 444 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 TEAD1P28347 426 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 HMGCLP35914 325 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 KIAA1024LP59773 190 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 DCDC1P59894 354 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 CDK3Q00526 305 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 PTK2BQ14289 1009 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 PTPRCAPQ14761 206 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 TAF1AQ15573 450 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-206ENST00000412056 RSPO4Q2I0M5 234 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-206ENST00000412056 KCTD16Q68DU8 428 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 PPP1R21Q6ZMI0 780 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 LINC00523Q86TU6 105 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 PARGQ86W56 976 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 OXR1Q8N573 874 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 EIF2B3Q9NR50 452 aaKnown RBP13.89□□□□□ -0.19
CPNE1-206ENST00000412056 DNAJC28Q9NX36 388 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■■■■□ 24.6
CPNE1-206ENST00000412056 IL17CQ9P0M4 197 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 NFKBIL1Q9UBC1 381 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-206ENST00000412056 PCYOX1Q9UHG3 505 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 KLF15Q9UIH9 416 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 CDV3Q9UKY7 258 aaKnown RBP13.89□□□□□ -0.19
CPNE1-206ENST00000412056 KCTD3Q9Y597 815 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 MYO15AQ9UKN7 3530 aa13.89□□□□□ -0.19
CPNE1-206ENST00000412056 ARHGEF17Q96PE2 2063 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-206ENST00000412056 TCRBV7S3A2A0A539 114 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 RGSL1A5PLK6 1076 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 CCDC188H7C350 402 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 CACNB4O00305 520 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-206ENST00000412056 INPP4BO15327 924 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 DFNA5O60443 496 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 SDC3O75056 442 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 ZNF883P0CG24 379 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 MYCLP1P12525 358 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-206ENST00000412056 LPOP22079 712 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-206ENST00000412056 EPHA8P29322 1005 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-206ENST00000412056 PTGIRP43119 386 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 RXRGP48443 463 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 ARRB1P49407 418 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-206ENST00000412056 CDH17Q12864 832 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 BNIP3Q12983 259 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 SEPT6Q14141 434 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 KCNJ11Q14654 390 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 POU6F1Q14863 301 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 ENPP7Q6UWV6 458 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 TRIM74Q86UV6 250 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 NLRP8Q86W28 1048 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 GATAD2AQ86YP4 633 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 RBFAQ8N0V3 343 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 DNAAF3Q8N9W5 541 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 OR4K2Q8NGD2 314 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 OR13C4Q8NGS5 318 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 BRSK1Q8TDC3 778 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 ZNF592Q92610 1267 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 SLCO2A1Q92959 643 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 WDR92Q96MX6 357 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 SPATA16Q9BXB7 569 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 TEX101Q9BY14 249 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 TCEAL2Q9H3H9 227 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-206ENST00000412056 CASS4Q9NQ75 786 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 PHPT1Q9NRX4 125 aaPredicted RBP13.88□□□□□ -0.19
CPNE1-206ENST00000412056 RAD18Q9NS91 495 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 KLQ9UEF7 1012 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 PCNX2A6NKB5 2137 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 CEP250Q9BV73 2442 aa13.88□□□□□ -0.19
CPNE1-206ENST00000412056 TMEM202A6NGA9 273 aa13.87□□□□□ -0.19
CPNE1-206ENST00000412056 SLC30A4O14863 429 aa13.87□□□□□ -0.19
CPNE1-206ENST00000412056 SCAMP1O15126 338 aa13.87□□□□□ -0.19
CPNE1-206ENST00000412056 STX7O15400 261 aaKnown RBP13.87□□□□□ -0.19
CPNE1-206ENST00000412056 LDB2O43679 373 aa13.87□□□□□ -0.19
CPNE1-206ENST00000412056 PIAS2O75928 621 aa13.87□□□□□ -0.19
CPNE1-206ENST00000412056 URI1O94763 535 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-206ENST00000412056 CSF2P04141 144 aa13.87□□□□□ -0.19
CPNE1-206ENST00000412056 HOXC4P09017 264 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-206ENST00000412056 CD59P13987 128 aa13.87□□□□□ -0.19
CPNE1-206ENST00000412056 NME1P15531 152 aaKnown RBP13.87□□□□□ -0.19
CPNE1-206ENST00000412056 TPSB2P20231 275 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms