RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 TNRC6CQ9HCJ0 1690 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 FAM208AQ9UK61 1670 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 USP42Q9H9J4 1324 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 COL18A1P39060 1754 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NFAT5O94916 1531 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KCPQ6ZWJ8 1503 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KIAA1210Q9ULL0 1709 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 IGKV2D-30A0A075B6S6 120 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TRBV5-7A0A0A0MS05 114 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PABPN1LA6NDY0 278 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KCNU1A8MYU2 1149 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 E5RJQ4 531 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MS4A18H0YCH9 400 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 VWA5AO00534 786 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ASAP2O43150 1006 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TLX3O43711 291 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TLR2O60603 784 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 USO1O60763 962 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CNOT3O75175 753 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TACC1O75410 805 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 STARD3NLO95772 234 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 LATS1O95835 1130 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HEXAP06865 529 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PRR35P0CG20 571 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HSPA8P11142 646 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZNF182P17025 639 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 BDNFP23560 247 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 RRM1P23921 792 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 AVPR1AP37288 418 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ME1P48163 572 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MMP14P50281 582 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 RASSF2P50749 326 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SRSF1Q07955 248 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 DSC1Q08554 894 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NIPAL4Q0D2K0 466 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HYAL1Q12794 435 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 EPS8Q12929 822 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 DRAP1Q14919 205 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PGM5Q15124 567 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TWIST1Q15672 202 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ADIPOQQ15848 244 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 C15orf59Q2T9L4 293 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZSCAN23Q3MJ62 389 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ENTPD8Q5MY95 495 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PLEKHS1Q5SXH7 462 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MFSD4BQ5TF39 518 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TXNDC8Q6A555 127 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KIAA1161Q6NSJ0 714 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CES5AQ6NT32 575 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TSSK4Q6SA08 328 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 IKBIPQ70UQ0 350 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 YTHDF3Q7Z739 585 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PXKQ7Z7A4 578 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZDHHC17Q8IUH5 632 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 LURAP1LQ8IV03 231 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ARHGAP12Q8IWW6 846 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KIAA2013Q8IYS2 634 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CNTROBQ8N137 903 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TMEM217Q8N7C4 229 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 LRRC57Q8N9N7 239 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MCUQ8NE86 351 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 BEST2Q8NFU1 509 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 DNAAF4Q8WXU2 420 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PIGBQ92521 554 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ATOH1Q92858 354 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CALML4Q96GE6 196 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZNF570Q96NI8 536 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SLITRK1Q96PX8 696 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NUDCD1Q96RS6 583 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TMEM79Q9BSE2 394 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 GATA5Q9BWX5 397 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MRPL1Q9BYD6 325 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SIL1Q9H173 461 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PDGFCQ9NRA1 345 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HIF1ANQ9NWT6 349 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 UBA2Q9UBT2 640 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 FBXO4Q9UKT5 387 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SBF2Q86WG5 1849 aa2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ROCK2O75116 1388 aaKnown RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TNRC18O15417 2968 aaPredicted RBP2.69□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TRBV5-3A0A0A0MS03 114 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SMIM35A0A1B0GVV1 85 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 A6NCN8 305 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NPIPB15A6NHN6 443 aaPredicted RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TAF4O00268 1085 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 IPO8O15397 1037 aaKnown RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TIMM44O43615 452 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PAGE4O60829 102 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ATP2C2O75185 946 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 IFNA2P01563 188 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SCP2P22307 547 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TM4SF1P30408 202 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HOXA13P31271 388 aaPredicted RBP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TTKP33981 857 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 EPHX2P34913 555 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ARHGAP25P42331 645 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MATR3P43243 847 aaKnown RBP eCLIP2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SNX16P57768 344 aa2.68□□□□□ -1.98
RNU6-1140P-201ENST00000410517 FKBP1BP68106 108 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms