RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 MS4A12Q9NXJ0 267 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 EIF3KQ9UBQ5 218 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PGAP2Q9UHJ9 254 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PFDN2Q9UHV9 154 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 TSPAN16Q9UKR8 245 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 FBXO4Q9UKT5 387 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 SIT1Q9Y3P8 196 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PCDHB14Q9Y5E9 798 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PCDHGA5Q9Y5G8 931 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 MAGED1Q9Y5V3 778 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 NFIBO00712 420 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CHADO15335 359 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 SLC16A5O15375 505 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 FLRT2O43155 660 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CYP26A1O43174 497 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 JAK2O60674 1132 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 NDST3O95803 873 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 F2P00734 622 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PLEKP08567 350 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CXCL8P10145 99 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 KCNE1P15382 129 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 H2AFXP16104 143 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 GOT1P17174 413 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 HOXB9P17482 250 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 DNAJB1P25685 340 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CORO1AP31146 461 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 MC3RP41968 323 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 STAT5AP42229 794 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 KHKP50053 298 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CLCN2P51788 898 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PPP2R2AP63151 447 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 RUNX1T1Q06455 604 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 FCHO2Q0JRZ9 810 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 RASGEF1BQ0VAM2 473 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 MKRN4PQ13434 485 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 RAB33AQ14088 237 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 LARS2Q15031 903 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 ARHGAP17Q68EM7 881 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 TLDC1Q6P9B6 456 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 POTEHQ6S545 545 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 KLHL17Q6TDP4 642 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 LRRC74BQ6ZQY2 392 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 TPGS1Q6ZTW0 290 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 IKBIPQ70UQ0 350 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 RASGRP2Q7LDG7 609 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 LRRTM4Q86VH4 590 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 DENND1CQ8IV53 801 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 ST13P4Q8IZP2 240 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 MIER2Q8N344 545 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 ANKRD42Q8N9B4 389 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CLEC1AQ8NC01 280 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 ST13P5Q8NFI4 369 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 SH3RF2Q8TEC5 729 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 FNIP1Q8TF40 1166 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CATSPER2Q96P56 530 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 OR2M4Q96R27 311 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 C17orf80Q9BSJ5 609 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 LMF2Q9BU23 707 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CENPOQ9BU64 300 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 TDRD1Q9BXT4 1180 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 HOXD1Q9GZZ0 328 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 LACRTQ9GZZ8 138 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 EPHX3Q9H6B9 360 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 UBE2ZQ9H832 354 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PNO1Q9NRX1 252 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 INTS9Q9NV88 658 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 TRMT1Q9NXH9 659 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 COQ3Q9NZJ6 369 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CDC23Q9UJX2 597 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 ACOT9Q9Y305 439 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CLIC4Q9Y696 253 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CHURC1-FNTBB4DL54 471 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 TRDMT1O14717 391 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 AREL1O15033 823 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PI15O43692 258 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 ATG12O94817 140 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 TP53P04637 393 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 IQCF3P0C7M6 154 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 MTHFD1P11586 935 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 FCGR2AP12318 317 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CCNCP24863 283 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PBX3P40426 434 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 GRIA4P48058 902 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 KCNJ5P48544 419 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 PLP2Q04941 152 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 EFR3AQ14156 821 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 CCDC85BQ15834 202 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 SGCBQ16585 318 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 TTMPQ5BVD1 217 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 SPDYCQ5MJ68 293 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 OTUD3Q5T2D3 398 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 NT5DC1Q5TFE4 455 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 FAM109BQ6ICB4 259 aaPredicted RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 IRGCQ6NXR0 463 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 MSANTD2Q6P1R3 559 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 RBMS3Q6XE24 437 aaKnown RBP2.1□□□□□ -2.07
SCN7A-201ENST00000409855 C15orf39Q6ZRI6 1047 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 SERINC5Q86VE9 423 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 LINC00471Q8N535 108 aa2.1□□□□□ -2.07
SCN7A-201ENST00000409855 SLC4A11Q8NBS3 891 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms