RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TRIP6Q15654 476 aaKnown RBP10.87□□□□□ -0.67
CHMP3-205ENST00000409810 CDKN3Q16667 212 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 ZNF542PQ5EBM4 170 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 TPRG1LQ5T0D9 272 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 C4orf22Q6V702 233 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 GLT6D1Q7Z4J2 308 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 TMC3Q7Z5M5 1100 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 SDR16C5Q8N3Y7 309 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 RASGEF1CQ8N431 466 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 OR56A4Q8NGH8 313 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 BAHD1Q8TBE0 780 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-205ENST00000409810 BLOC1S5Q8TDH9 187 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 TBL1YQ9BQ87 522 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 ZSCAN5AQ9BUG6 496 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 TEX101Q9BY14 249 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 FAM83DQ9H4H8 585 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 LRRC40Q9H9A6 602 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHMP3-205ENST00000409810 PAK5Q9P286 719 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 NFKBIL1Q9UBC1 381 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-205ENST00000409810 PYCARDQ9ULZ3 195 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 CSNK1G3Q9Y6M4 447 aa10.87□□□□□ -0.67
CHMP3-205ENST00000409810 ARHGEF17Q96PE2 2063 aaPredicted RBP10.87□□□□□ -0.67
CHMP3-205ENST00000409810 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 GOLGA6L10A0A0M3HER8 536 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 A0A0U1RQS6 177 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 ERI2A8K979 691 aaKnown RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 K7ESM1 405 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 PGRMC1O00264 195 aaKnown RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 SCAMP1O15126 338 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 AQP9O43315 295 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 TNFSF14O43557 240 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 CBFA2T3O75081 653 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 LDOC1O95751 146 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 TCP1P17987 556 aaKnown RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 ADRA1AP35348 466 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 HMGCLP35914 325 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 LMAN1P49257 510 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 HK3P52790 923 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 GNG11P61952 73 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 SIM1P81133 766 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 PDE1BQ01064 536 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 FOXK2Q01167 660 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 ELOCQ15369 112 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 SIX1Q15475 284 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 HENMT1Q5T8I9 393 aaKnown RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 PDPK2PQ6A1A2 396 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 ADAMTSL4Q6UY14 1074 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 KDM7AQ6ZMT4 941 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 GSTA5Q7RTV2 222 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 KANSL1Q7Z3B3 1105 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 GLRX5Q86SX6 157 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 LINC00523Q86TU6 105 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 GKN2Q86XP6 184 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 HID1Q8IV36 788 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 KLHDC8BQ8IXV7 354 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 FSTL5Q8N475 847 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 EID2Q8N6I1 236 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 ZNF548Q8NEK5 533 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 OR4C6Q8NH72 309 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 LMX1AQ8TE12 382 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 SCAMP4Q969E2 229 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 CNDP2Q96KP4 475 aaKnown RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 CAMK1GQ96NX5 476 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 OSBPL9Q96SU4 736 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 GORASP1Q9BQQ3 440 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 RIOK2Q9BVS4 552 aaKnown RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 SPATA16Q9BXB7 569 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 NLGN3Q9NZ94 848 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 MOSPD1Q9UJG1 213 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 TTC7AQ9ULT0 858 aaPredicted RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 DOLKQ9UPQ8 538 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 APOBEC2Q9Y235 224 aaKnown RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 DRG1Q9Y295 367 aaKnown RBP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 BTBD3Q9Y2F9 522 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 PKP3Q9Y446 797 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHMP3-205ENST00000409810 DGKBQ9Y6T7 804 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 MYLKQ15746 1914 aa10.86□□□□□ -0.67
CHMP3-205ENST00000409810 PRSS38A1L453 326 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 C2orf81A6NN90 581 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 USP27XA6NNY8 438 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 E7EVH7 732 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 TPP1O14773 563 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 GIPC1O14908 333 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 FFAR2O15552 330 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 PPFIA2O75334 1257 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 TRIM16O95361 564 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 METTL18O95568 372 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 CRTAMO95727 393 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 AP2A1O95782 977 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 GAS8O95995 478 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 AGTP01019 485 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 ANXA6P08133 673 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 SPAM1P38567 509 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 CHRNA4P43681 627 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 PEX6Q13608 980 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 TAF1AQ15573 450 aaPredicted RBP10.85□□□□□ -0.67
CHMP3-205ENST00000409810 ALG11Q2TAA5 492 aa10.85□□□□□ -0.67
CHMP3-205ENST00000409810 PRRT3Q5FWE3 981 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms