RNA–Protein interactions for RNA: ENST00000409712.5

SUMO1-209, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 2 BASIC

Gene SUMO1, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-209ENST00000409712 SAMD15Q9P1V8 674 aa16.57■□□□□ 0.24
SUMO1-209ENST00000409712 CD84Q9UIB8 345 aa16.57■□□□□ 0.24
SUMO1-209ENST00000409712 RAB23Q9ULC3 237 aa16.57■□□□□ 0.24
SUMO1-209ENST00000409712 HS3ST3A1Q9Y663 406 aa16.57■□□□□ 0.24
SUMO1-209ENST00000409712 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
SUMO1-209ENST00000409712 MAGEB16A2A368 324 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 GOLGA8CPA6NN73 597 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 E7ESA3 106 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 H7C0S8 307 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 FPGTO14772 594 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 EIF3HO15372 352 aaKnown RBP eCLIP16.56■□□□□ 0.24
SUMO1-209ENST00000409712 PYGLP06737 847 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 TSHRP16473 764 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 ITPKAP23677 461 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 MAOBP27338 520 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 TEAD1P28347 426 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 HOXD12P35452 270 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 NBL1P41271 181 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 RACK1P63244 317 aaKnown RBP16.56■□□□□ 0.24
SUMO1-209ENST00000409712 DHX9Q08211 1270 aaKnown RBP16.56■□□□□ 0.24
SUMO1-209ENST00000409712 PTPRCAPQ14761 206 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 SKIDA1Q1XH10 827 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 BBS9Q3SYG4 887 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 MSS51Q4VC12 460 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 GCNT7Q6ZNI0 430 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 FAM174AQ8TBP5 190 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 SCAMP4Q969E2 229 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 DNAJC1Q96KC8 554 aaKnown RBP16.56■□□□□ 0.24
SUMO1-209ENST00000409712 PWWP2AQ96N64 755 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 SLC6A18Q96N87 628 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 MYOCQ99972 504 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 RIOK2Q9BVS4 552 aaKnown RBP16.56■□□□□ 0.24
SUMO1-209ENST00000409712 MIR1-1HGQ9H1L0 117 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 MBNL1Q9NR56 388 aaKnown RBP16.56■□□□□ 0.24
SUMO1-209ENST00000409712 CHRAC1Q9NRG0 131 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 SUSD2Q9UGT4 822 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 PILRBQ9UKJ0 227 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 SMG5Q9UPR3 1016 aaKnown RBP16.56■□□□□ 0.24
SUMO1-209ENST00000409712 SLCO1B1Q9Y6L6 691 aa16.56■□□□□ 0.24
SUMO1-209ENST00000409712 PLXNB3Q9ULL4 1909 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 FAM237BA0A1B0GVD1 139 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 TOR1BO14657 336 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 EPN2O95208 641 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 PCCBP05166 539 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 STAT4Q14765 748 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 ALS2CLQ60I27 953 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 PDPK2PQ6A1A2 396 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 LAIR1Q6GTX8 287 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 PNCKQ6P2M8 343 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 CASC4Q6P4E1 433 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 KYAT3Q6YP21 454 aaKnown RBP16.55■□□□□ 0.24
SUMO1-209ENST00000409712 CENPUQ71F23 418 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 ABI3BPQ7Z7G0 1075 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 SYT12Q8IV01 421 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 TRAM1L1Q8N609 369 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 OR13J1Q8NGT2 312 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 RUBCNQ92622 972 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 STAMBPL1Q96FJ0 436 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 ZNF778Q96MU6 729 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 NAT9Q9BTE0 207 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 ZSCAN5AQ9BUG6 496 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 TM9SF3Q9HD45 589 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 IL26Q9NPH9 171 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 TREX1Q9NSU2 369 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 MTRF1LQ9UGC7 380 aaKnown RBP16.55■□□□□ 0.24
SUMO1-209ENST00000409712 FKBPLQ9UIM3 349 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 APPL1Q9UKG1 709 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 PCDHGA5Q9Y5G8 931 aa16.55■□□□□ 0.24
SUMO1-209ENST00000409712 ATXN2Q99700 1313 aaKnown RBP16.54■□□□□ 0.24
SUMO1-209ENST00000409712 GLYATL1P3A0A0U1RQE8 302 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 CCDC78A2IDD5 438 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 A6NNZ2 444 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 PRR5-ARHGAP8B1AHC4 643 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 GAPDHSO14556 408 aaPredicted RBP16.54■□□□□ 0.24
SUMO1-209ENST00000409712 BCAT2O15382 392 aaPredicted RBP16.54■□□□□ 0.24
SUMO1-209ENST00000409712 BANF1O75531 89 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 SOD1P00441 154 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 GNSP15586 552 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 NMBRP28336 390 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 ECHS1P30084 290 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 CARSP49589 748 aaKnown RBP16.54■□□□□ 0.24
SUMO1-209ENST00000409712 CLDN2P57739 230 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 TMPRSS15P98073 1019 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 XIAPP98170 497 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 PDIA2Q13087 525 aaKnown RBP16.54■□□□□ 0.24
SUMO1-209ENST00000409712 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
SUMO1-209ENST00000409712 LPAL2Q16609 132 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 RAET1GQ6H3X3 334 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 TMEM135Q86UB9 458 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 IQCHQ86VS3 1027 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 CCNJLQ8IV13 435 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 PELI3Q8N2H9 469 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 MFSD2AQ8NA29 543 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 SUMF1Q8NBK3 374 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 PLA2G15Q8NCC3 412 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 IFT81Q8WYA0 676 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 CDKN2AIPNLQ96HQ2 116 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 BMFQ96LC9 184 aa16.54■□□□□ 0.24
SUMO1-209ENST00000409712 EBNA1BP2Q99848 306 aaKnown RBP16.54■□□□□ 0.24
SUMO1-209ENST00000409712 SPATA16Q9BXB7 569 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms