RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 CDC6Q99741 560 aa20.76■□□□□ 0.91
C4orf48-201ENST00000409248 CARD6Q9BX69 1037 aa20.76■□□□□ 0.91
C4orf48-201ENST00000409248 DNAJC28Q9NX36 388 aa20.76■□□□□ 0.91
C4orf48-201ENST00000409248 LOC285095A0A1B0GVY8 99 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 RAD51CO43502 376 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 HLA-DPA1P20036 260 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 HTR1BP28222 390 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 ADCY8P40145 1251 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 HNRNPKP61978 463 aaKnown RBP eCLIP20.75■□□□□ 0.91
C4orf48-201ENST00000409248 GALNT3Q14435 633 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 KCTD19Q17RG1 926 aaPredicted RBP20.75■□□□□ 0.91
C4orf48-201ENST00000409248 KCTD11Q693B1 232 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 ESRP1Q6NXG1 681 aaKnown RBP20.75■□□□□ 0.91
C4orf48-201ENST00000409248 C8orf74Q6P047 294 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 TSPAN33Q86UF1 283 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 GATAD2AQ86YP4 633 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 MMGT1Q8N4V1 131 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 RHBDD1Q8TEB9 315 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 CAMK1GQ96NX5 476 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 LYSMD1Q96S90 227 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 TBL1YQ9BQ87 522 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 TRIM51Q9BSJ1 452 aa20.75■□□□□ 0.91
C4orf48-201ENST00000409248 EIF2B3Q9NR50 452 aaKnown RBP20.75■□□□□ 0.91
C4orf48-201ENST00000409248 COL5A1P20908 1838 aaPredicted RBP20.75■□□□□ 0.91
C4orf48-201ENST00000409248 ANKRD66B4E2M5 251 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 GIPC1O14908 333 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 CBFA2T3O75081 653 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 FGF1P05230 155 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 APRTP07741 180 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 NME1P15531 152 aaKnown RBP20.74■□□□□ 0.91
C4orf48-201ENST00000409248 GM2AP17900 193 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 ADRA1AP35348 466 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 SPARCL1Q14515 664 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 INPP5AQ14642 412 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 NFATC4Q14934 902 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 QPCTQ16769 361 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 CRTC1Q6UUV9 634 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 HSD11B1LQ7Z5J1 315 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 LINC00523Q86TU6 105 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 RAVER1Q8IY67 606 aaKnown RBP20.74■□□□□ 0.91
C4orf48-201ENST00000409248 BTBD3Q9Y2F9 522 aa20.74■□□□□ 0.91
C4orf48-201ENST00000409248 C1orf232A0A0U1RR37 186 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 CACNB4O00305 520 aaPredicted RBP20.73■□□□□ 0.91
C4orf48-201ENST00000409248 SDC3O75056 442 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 AGTP01019 485 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 CSF2P04141 144 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 ATXN1LP0C7T5 689 aaKnown RBP20.73■□□□□ 0.91
C4orf48-201ENST00000409248 TSHRP16473 764 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 TPSB2P20231 275 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 KELP23276 732 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 ETV3P41162 512 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 STC1P52823 247 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 KIAA1024LP59773 190 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 SIM1P81133 766 aaPredicted RBP20.73■□□□□ 0.91
C4orf48-201ENST00000409248 TRIP6Q15654 476 aaKnown RBP20.73■□□□□ 0.91
C4orf48-201ENST00000409248 TPSAB1Q15661 275 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 SLC1A5Q15758 541 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 KDM7AQ6ZMT4 941 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 SLC25A41Q8N5S1 370 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 BAHD1Q8TBE0 780 aaPredicted RBP20.73■□□□□ 0.91
C4orf48-201ENST00000409248 BTN2A2Q8WVV5 523 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 SRPK1Q96SB4 655 aaKnown RBP20.73■□□□□ 0.91
C4orf48-201ENST00000409248 APOOQ9BUR5 198 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 WDR26Q9H7D7 661 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 FTSJ1Q9UET6 329 aa20.73■□□□□ 0.91
C4orf48-201ENST00000409248 PCNX2A6NKB5 2137 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 SPAARA0A1B0GVQ0 90 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 EFCAB8A8MWE9 144 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 PIAS2O75928 621 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 SUN1O94901 812 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 MAGEA6P43360 314 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 TERF1P54274 439 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 MRPS25P82663 173 aaKnown RBP20.72■□□□□ 0.91
C4orf48-201ENST00000409248 CDK16Q00536 496 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 BNIP3Q12983 259 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 PTPRRQ15256 657 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 SIRPB2Q5JXA9 342 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 TPRG1LQ5T0D9 272 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 RANBP10Q6VN20 620 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 PPP1R21Q6ZMI0 780 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 Q6ZVL8 140 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 ZNF765Q7L2R6 523 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 KANSL1Q7Z3B3 1105 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 PCGF5Q86SE9 256 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 GLRX5Q86SX6 157 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 CBARPQ8N350 705 aaPredicted RBP20.72■□□□□ 0.91
C4orf48-201ENST00000409248 PLA2G15Q8NCC3 412 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 WDR92Q96MX6 357 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 APOL2Q9BQE5 337 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 RAB17Q9H0T7 212 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 UTP11Q9Y3A2 253 aaKnown RBP20.72■□□□□ 0.91
C4orf48-201ENST00000409248 OR1A2Q9Y585 309 aa20.72■□□□□ 0.91
C4orf48-201ENST00000409248 DNAH14Q0VDD8 3507 aa20.71■□□□□ 0.91
C4orf48-201ENST00000409248 NEMP2A6NFY4 417 aa20.71■□□□□ 0.91
C4orf48-201ENST00000409248 GOLGA8CPA6NN73 597 aa20.71■□□□□ 0.91
C4orf48-201ENST00000409248 DNALI1O14645 258 aaPredicted RBP20.71■□□□□ 0.91
C4orf48-201ENST00000409248 NDC80O14777 642 aa20.71■□□□□ 0.91
C4orf48-201ENST00000409248 USP12O75317 370 aa20.71■□□□□ 0.91
C4orf48-201ENST00000409248 PYGLP06737 847 aa20.71■□□□□ 0.91
C4orf48-201ENST00000409248 ADRB1P08588 477 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms