RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 KITP10721 976 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 STMN1P16949 149 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 ADSLP30566 484 aaPredicted RBP12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 HOXA6P31267 233 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 CTHP32929 405 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 ADRA1AP35348 466 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 IRX4P78413 519 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 MXRA7P84157 204 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 ZXDBP98169 803 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 POU4F1Q01851 419 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 IL10RBQ08334 325 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 KIAA1211LQ6NV74 962 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 C16orf46Q6P387 395 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 KLC3Q6P597 504 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 SETD3Q86TU7 594 aaPredicted RBP12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 ZC3HC1Q86WB0 502 aaKnown RBP12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 RALGPS2Q86X27 583 aaPredicted RBP12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 C10orf107Q8IVU9 208 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 ENDOVQ8N8Q3 282 aaKnown RBP12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 NETO2Q8NC67 525 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 SH3RF2Q8TEC5 729 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 PEX13Q92968 403 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 RSPRY1Q96DX4 576 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 MFSD3Q96ES6 412 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 MSANTD3Q96H12 275 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 ZNF599Q96NL3 588 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 TRIM56Q9BRZ2 755 aaKnown RBP12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 KLF16Q9BXK1 252 aaPredicted RBP12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 PIH1D1Q9NWS0 290 aaKnown RBP12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 STOML1Q9UBI4 398 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 NEU3Q9UQ49 428 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 PCDHGA5Q9Y5G8 931 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 SPAG17Q6Q759 2223 aa12.93□□□□□ -0.34
SMARCB1-203ENST00000407082 IGLV3-10A0A075B6K4 115 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 DRGXA6NNA5 263 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 CAPN14A8MX76 684 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 B2RBV5 119 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 F8W8V4 182 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 LEFTY2O00292 366 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 ARNTLO00327 626 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 SLC22A2O15244 555 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 ANP32DO95626 131 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 HMBSP08397 361 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 IRF1P10914 325 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 TPH1P17752 444 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 CES1P23141 567 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 NMBRP28336 390 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 PGM1P36871 562 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 CD151P48509 253 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 SERPINH1P50454 418 aaKnown RBP12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 RAP1GDS1P52306 607 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 RAB10P61026 200 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 E2F5Q15329 346 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 SLC14A2Q15849 920 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 UAP1L1Q3KQV9 507 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 LIPMQ5VYY2 423 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 RANBP10Q6VN20 620 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 ZYG11AQ6WRX3 759 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 UTP4Q969X6 686 aaKnown RBP12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 SCYL1Q96KG9 808 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 ZFRQ96KR1 1074 aaKnown RBP12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 LRRC3BQ96PB8 259 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 NUDCD1Q96RS6 583 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 MCMBPQ9BTE3 642 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 CCDC106Q9BWC9 280 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 CADM1Q9BY67 442 aaKnown RBP12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 NMUR2Q9GZQ4 415 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 BATF3Q9NR55 127 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 FBXO6Q9NRD1 293 aaPredicted RBP12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 OBP2AQ9NY56 170 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 CFAP97Q9P2B7 532 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 SLC39A10Q9ULF5 831 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 CORO1CQ9ULV4 474 aaPredicted RBP12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 C15orf41Q9Y2V0 281 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 RAP2CQ9Y3L5 183 aa12.92□□□□□ -0.34
SMARCB1-203ENST00000407082 DOCK4Q8N1I0 1966 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 LUC7L3O95232 432 aaKnown RBP12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 GSRP00390 522 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 HLA-DQB2P05538 268 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 ENO1P06733 434 aaKnown RBP12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 GCKP35557 465 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 WNT3AP56704 352 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 ITKQ08881 620 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 PRKAA1Q13131 559 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 ITGA9Q13797 1035 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 GRM3Q14832 879 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 ZNF77Q15935 545 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 TRMT5Q32P41 509 aaKnown RBP12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 MS4A13Q5J8X5 152 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 NET1Q7Z628 596 aaPredicted RBP12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 SYNPOQ8N3V7 929 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 TEX26Q8N6G2 289 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 C2CD4AQ8NCU7 369 aaPredicted RBP12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 OR6Y1Q8NGX8 325 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 BPIFB1Q8TDL5 484 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 IMP4Q96G21 291 aaKnown RBP12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 FAR2Q96K12 515 aa12.91□□□□□ -0.34
SMARCB1-203ENST00000407082 AGAP2Q99490 1192 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms