RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 PMM2O15305 246 aa13.33□□□□□ -0.27
SNED1-205ENST00000405547 GTF2E2P29084 291 aaKnown RBP13.33□□□□□ -0.27
SNED1-205ENST00000405547 EPHX2P34913 555 aa13.33□□□□□ -0.27
SNED1-205ENST00000405547 ACTR3P61158 418 aa13.33□□□□□ -0.27
SNED1-205ENST00000405547 XKR6Q5GH73 641 aa13.33□□□□□ -0.27
SNED1-205ENST00000405547 ZNF317Q96PQ6 595 aaPredicted RBP13.33□□□□□ -0.27
SNED1-205ENST00000405547 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 FAM47E-STBD1D6RA91 191 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 PPP1R11O60927 126 aaPredicted RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 CHRNGP07510 517 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 CHRNB2P17787 502 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 BMP7P18075 431 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 ITGA7Q13683 1181 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 NXF3Q9H4D5 531 aaKnown RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 EBF2Q9HAK2 575 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 ITGAXP20702 1163 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 IGFBP5P24593 272 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 PPM1JQ5JR12 505 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 HECTD2Q5U5R9 776 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 ERICH5Q6P6B1 374 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 ZDHHC24Q6UX98 284 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 SATL1Q86VE3 508 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 CBR4Q8N4T8 237 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 CXorf21Q9HAI6 301 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 RPRD1BQ9NQG5 326 aaKnown RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 ELOVL7A1L3X0 281 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 CLDN5O00501 218 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 THRBP10828 461 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 FCHO2Q0JRZ9 810 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 CNPY1Q3B7I2 92 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 KRT77Q7Z794 578 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 ZNF781Q8N8C0 355 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 FCRL2Q96LA5 508 aaPredicted RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 CD320Q9NPF0 282 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 TRNAU1APQ9NX07 287 aaKnown RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 AKAP7Q9P0M2 348 aaPredicted RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 NUP98P52948 1817 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 DHX15O43143 795 aaKnown RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 OR10H3O60404 316 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 CYP4B1P13584 511 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 NELFEP18615 380 aaKnown RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 MAXP61244 160 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 RAB2BQ8WUD1 216 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 STYXQ8WUJ0 223 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 TWIST2Q8WVJ9 160 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 ADAM2Q99965 735 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 KIFC1Q9BW19 673 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.33□□□□□ -0.28
SNED1-205ENST00000405547 TRIM39Q9HCM9 518 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 HES2Q9Y543 173 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 DUOX1Q9NRD9 1551 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 BUD23O43709 281 aaKnown RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 PAGE1O75459 146 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 NR2F1P10589 423 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 POLR2EP19388 210 aaKnown RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 MYL9P24844 172 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 CXXC5Q7LFL8 322 aaKnown RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 MON1AQ86VX9 555 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 NXNL1Q96CM4 212 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 PDGFDQ9GZP0 370 aaPredicted RBP13.33□□□□□ -0.28
SNED1-205ENST00000405547 TOR4AQ9NXH8 423 aa13.33□□□□□ -0.28
SNED1-205ENST00000405547 UBE2QL1A1L167 161 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 CLDN25C9JDP6 229 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 NPHS1O60500 1241 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 ABL2P42684 1182 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 MAPK9P45984 424 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 EVX2Q03828 476 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 SGCGQ13326 291 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 PLET1Q6UQ28 207 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 UNC5BQ8IZJ1 945 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 TCAIMQ8N3R3 496 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 MAB21L3Q8N8X9 362 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 BSNDQ8WZ55 320 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 TMEM59LQ9UK28 342 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 PCDHB1Q9Y5F3 818 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 ECDO95905 644 aaPredicted RBP13.32□□□□□ -0.28
SNED1-205ENST00000405547 UNGP13051 313 aaPredicted RBP13.32□□□□□ -0.28
SNED1-205ENST00000405547 FOXN2P32314 431 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 GNPDA1P46926 289 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 RPS6KA3P51812 740 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 ZFP69Q49AA0 526 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 OLFML1Q6UWY5 402 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 LRRN4Q8WUT4 740 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 IKZF4Q9H2S9 585 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 DMAC2Q9NW81 257 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 PTGFRNQ9P2B2 879 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 ST3GAL5Q9UNP4 418 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 POLR3HQ9Y535 204 aaPredicted RBP13.32□□□□□ -0.28
SNED1-205ENST00000405547 SETD1AO15047 1707 aaKnown RBP13.32□□□□□ -0.28
SNED1-205ENST00000405547 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
SNED1-205ENST00000405547 ANGPTL1O95841 491 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 CST3P01034 146 aaPredicted RBP13.32□□□□□ -0.28
SNED1-205ENST00000405547 UROSP10746 265 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 GMFBP60983 142 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 TEX47Q8TBZ9 253 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 EBF3Q9H4W6 596 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 MRPL42Q9Y6G3 142 aaKnown RBP13.32□□□□□ -0.28
SNED1-205ENST00000405547 U3KQV3 271 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 FOXO6A8MYZ6 492 aa13.32□□□□□ -0.28
SNED1-205ENST00000405547 ANKRD22Q5VYY1 191 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms