RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ALG11Q2TAA5 492 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 COL28A1Q2UY09 1125 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 ZNF284Q2VY69 593 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 ESCO2Q56NI9 601 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 SLC45A4Q5BKX6 768 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 HYIQ5T013 277 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 SNX30Q5VWJ9 437 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 ZKSCAN2Q63HK3 967 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 HIST2H2BCQ6DN03 193 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 HIST2H2BDQ6DRA6 164 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 Q6ZSV7 163 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 Q6ZTK2 550 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 PXKQ7Z7A4 578 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 PARP16Q8N5Y8 322 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 TEX45Q8NA69 505 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 BICD2Q8TD16 824 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 VOPP1Q96AW1 172 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 URB1-AS1Q96HZ7 61 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 BARD1Q99728 777 aaKnown RBP5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 MXRA8Q9BRK3 442 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 C1QTNF7Q9BXJ2 289 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 TKTL2Q9H0I9 626 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 SCPEP1Q9HB40 452 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 DBF4Q9UBU7 674 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 FAM96BQ9Y3D0 163 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 RAI2Q9Y5P3 530 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 A3GALT2U3KPV4 340 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 PALLDQ8WX93 1383 aa5.14□□□□□ -1.59
HMGB3P19-201ENST00000403971 PXDNLA1KZ92 1463 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 CKAP5Q14008 2032 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 A0A0U1RQF3 1178 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 PI4KAP2A4QPH2 592 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 BCAT2O15382 392 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 KLK8O60259 260 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 STARD3NLO95772 234 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 TFP02787 698 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 CBSLP0DN79 551 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 CBSP35520 551 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 RASSF2P50749 326 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 PLCD1P51178 756 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 RPL7AP62424 266 aaKnown RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 SETQ01105 290 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 CEBPZQ03701 1054 aaKnown RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 MED22Q15528 200 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 GSTA3Q16772 222 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 HIST2H2ACQ16777 129 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 FBXO46Q6PJ61 603 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 CPLX2Q6PUV4 134 aaKnown RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 ZNF367Q7RTV3 350 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 C1QL2Q7Z5L3 287 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 INTS12Q96CB8 462 aaKnown RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 GFM1Q96RP9 751 aaKnown RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 H2AFJQ9BTM1 129 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 ITPAQ9BY32 194 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 API5Q9BZZ5 524 aaKnown RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 PLEKHA4Q9H4M7 779 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 HYPKQ9NX55 129 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 ANKRD10Q9NXR5 420 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 MAP3K20Q9NYL2 800 aaKnown RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 NCKIPSDQ9NZQ3 722 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 LSM4Q9Y4Z0 139 aaKnown RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 INSL5Q9Y5Q6 135 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 USP16Q9Y5T5 823 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 QSER1Q2KHR3 1735 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 BCORQ6W2J9 1755 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 IBTKQ9P2D0 1353 aaPredicted RBP5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 MYH3P11055 1940 aa5.13□□□□□ -1.59
HMGB3P19-201ENST00000403971 C4BP0C0L5 1744 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 LRRC53A6NM62 1247 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 F5H0A9 414 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 SEC14L2O76054 403 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 DDX58O95786 925 aaKnown RBP5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 MT-CYBP00156 380 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 CYP1A2P05177 515 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 PCNAP12004 261 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 ARSBP15848 533 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 EIF2S2P20042 333 aaKnown RBP5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 OLR1P78380 273 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 MYBPC2Q14324 1141 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 FGFBP1Q14512 234 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 ARHGEF6Q15052 776 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 LEXMQ3ZCV2 418 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 NCAPH2Q6IBW4 605 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 CYP20A1Q6UW02 462 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 TRILQ7L0X0 811 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 PIM3Q86V86 326 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 GTF3C6Q969F1 213 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 ZNF48Q96MX3 618 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 WDFY2Q96P53 400 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 KRCC1Q9NPI7 259 aaPredicted RBP5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 DDX4Q9NQI0 724 aaKnown RBP5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 SLC6A13Q9NSD5 602 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 KCNE2Q9Y6J6 123 aa5.12□□□□□ -1.59
HMGB3P19-201ENST00000403971 C4AP0C0L4 1744 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 TUBGCP6Q96RT7 1819 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 RPS10-NUDT3A0A1W2PQS6 291 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 PRSS47A8MTI9 375 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 KDM4EB2RXH2 506 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 B4DGG1 531 aa5.11□□□□□ -1.59
HMGB3P19-201ENST00000403971 H3BNX3 289 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms