RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MAPK8P45983 427 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 SATB1Q01826 763 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 MLLT1Q03111 559 aaPredicted RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 ZRANB3Q5FWF4 1079 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 NXNQ6DKJ4 435 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 NET1Q7Z628 596 aaPredicted RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 RAB44Q7Z6P3 723 aaPredicted RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 METTL3Q86U44 580 aaKnown RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 CUZD1Q86UP6 607 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 RYBPQ8N488 228 aaPredicted RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 CFAP61Q8NHU2 1237 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 RHEBL1Q8TAI7 183 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 CLP1Q92989 425 aaKnown RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 STMN2Q93045 179 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 EXT2Q93063 718 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 CORO1BQ9BR76 489 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 GSTO2Q9H4Y5 243 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 TFB2MQ9H5Q4 396 aaKnown RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 KIAA1522Q9P206 1035 aaPredicted RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 PKP3Q9Y446 797 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 K7ERQ8 282 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 LEFTY2O00292 366 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 VPS26AO75436 327 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 PGLSO95336 258 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 MT-CO1P00395 513 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 PYGLP06737 847 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 GJA1P17302 382 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 PIK3R1P27986 724 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 RPL26P61254 145 aaKnown RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 HERVK_113P63132 956 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 RAD51Q06609 339 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 LMAN2Q12907 356 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 CUL3Q13618 768 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 TRMT5Q32P41 509 aaKnown RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 ACSBG2Q5FVE4 666 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 ZNF678Q5SXM1 525 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 PSAPL1Q6NUJ1 521 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 CPSF7Q8N684 471 aaKnown RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 WDR60Q8WVS4 1066 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 MAELQ96JY0 434 aaKnown RBP14.91□□□□□ -0.02
CBX3-202ENST00000396386 ERVK-6Q9BXR3 956 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 GPR63Q9BZJ6 419 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 DERL2Q9GZP9 239 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 ZNF385DQ9H6B1 395 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 BPIFA1Q9NP55 256 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 INSL6Q9Y581 213 aa14.91□□□□□ -0.02
CBX3-202ENST00000396386 H0Y3Z8 333 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 SDHDO14521 159 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 CCL16O15467 120 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 SKAP2O75563 359 aaPredicted RBP14.9□□□□□ -0.02
CBX3-202ENST00000396386 ANP32DO95626 131 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 IGSF6O95976 241 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 CYBBP04839 570 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 PKMP14618 531 aaKnown RBP14.9□□□□□ -0.02
CBX3-202ENST00000396386 ADSLP30566 484 aaPredicted RBP14.9□□□□□ -0.02
CBX3-202ENST00000396386 CSNK1DP48730 415 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 ATP6V0D1P61421 351 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 SLC25A3Q00325 362 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 PPIGQ13427 754 aaKnown RBP eCLIP14.9□□□□□ -0.026e-10■□□□□ 9.5
CBX3-202ENST00000396386 PEX6Q13608 980 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 OR4D1Q15615 310 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 PTPRNQ16849 979 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 PPM1LQ5SGD2 360 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 TPGS1Q6ZTW0 290 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 PTGR2Q8N8N7 351 aaPredicted RBP14.9□□□□□ -0.02
CBX3-202ENST00000396386 FIBINQ8TAL6 211 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.9□□□□□ -0.024e-10■■■■■ 86.3
CBX3-202ENST00000396386 FAM136AQ96C01 138 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 CATSPER2Q96P56 530 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 TCF25Q9BQ70 676 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 RTKNQ9BST9 563 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 MAGEE1Q9HCI5 957 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 PLK2Q9NYY3 685 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 ARHGAP26Q9UNA1 814 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 FAM50BQ9Y247 325 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 C15orf41Q9Y2V0 281 aa14.9□□□□□ -0.02
CBX3-202ENST00000396386 OAS3Q9Y6K5 1087 aaKnown RBP14.9□□□□□ -0.02
CBX3-202ENST00000396386 LCHNA4D1U4 455 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 H3BMM5 538 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 NRG2O14511 850 aaPredicted RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 SMAD6O43541 496 aaKnown RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 KERAO60938 352 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 SOCS5O75159 536 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 PSMG1O95456 288 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 FGBP02675 491 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 CTPS1P17812 591 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 KCNC1P48547 511 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 CDKN1CP49918 316 aaPredicted RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 BTKQ06187 659 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 BCL2L1Q07817 233 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 HERC3Q15034 1050 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 ZRSR2Q15696 482 aaKnown RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 PLEKHG6Q3KR16 790 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 KHDC1Q4VXA5 237 aaKnown RBP14.89□□□□□ -0.03
CBX3-202ENST00000396386 PAQR3Q6TCH7 311 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 LYSMD3Q7Z3D4 306 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 PIANPQ8IYJ0 282 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 OR6K2Q8NGY2 324 aa14.89□□□□□ -0.03
CBX3-202ENST00000396386 CLPTM1LQ96KA5 538 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms