RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ZRANB3Q5FWF4 1079 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 TMEM240Q5SV17 173 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 CAMK1DQ8IU85 385 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 RBM15BQ8NDT2 890 aaKnown RBP12.12□□□□□ -0.47
ITGB1-202ENST00000396033 SHKBP1Q8TBC3 707 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 POF1BQ8WVV4 589 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 TCF12Q99081 682 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 NUF2Q9BZD4 464 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 VTI1BQ9UEU0 232 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 CCL26Q9Y258 94 aa12.12□□□□□ -0.47
ITGB1-202ENST00000396033 SLCO1B7G3V0H7 640 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 RFPL2O75678 378 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 WFS1O76024 890 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PGLSO95336 258 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 CD1DP15813 335 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PFKLP17858 780 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 BMPR1AP36894 532 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 CLCN4P51793 760 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PDCD2Q16342 344 aaPredicted RBP12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PLEKHG6Q3KR16 790 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 SH2D4BQ5SQS7 431 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PSAPL1Q6NUJ1 521 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 ISCA2Q86U28 154 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 TMPRSS6Q8IU80 811 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 SLC22A9Q8IVM8 553 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 MRPL43Q8N983 215 aaKnown RBP12.11□□□□□ -0.47
ITGB1-202ENST00000396033 FBXO27Q8NI29 283 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 FIBINQ8TAL6 211 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 TCEAL4Q96EI5 215 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 CNDP1Q96KN2 507 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 GPR63Q9BZJ6 419 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 WDR55Q9H6Y2 383 aaPredicted RBP12.11□□□□□ -0.47
ITGB1-202ENST00000396033 FAM50BQ9Y247 325 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 LZTS1Q9Y250 596 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PKP3Q9Y446 797 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PFDN6O15212 129 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 GRID2O43424 1007 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 ALPIP09923 528 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 HNRNPLP14866 589 aaKnown RBP eCLIP12.11□□□□□ -0.471e-6■■□□□ 13.6
ITGB1-202ENST00000396033 LBX1P52954 281 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 BCL2L1Q07817 233 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 BLMHQ13867 455 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PSRC1Q6PGN9 363 aaPredicted RBP12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PIANPQ8IYJ0 282 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 CMTM8Q8IZV2 173 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 POU5F2Q8N7G0 328 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
ITGB1-202ENST00000396033 PTERQ96BW5 349 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 TLR9Q9NR96 1032 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 TAS2R13Q9NYV9 303 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 CDYLQ9Y232 598 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 VPS9D1Q9Y2B5 631 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 SLC4A7Q9Y6M7 1214 aa12.11□□□□□ -0.47
ITGB1-202ENST00000396033 MEI4A8MW99 385 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 DCXO43602 365 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 EPHA3P29320 983 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 TEAD2Q15562 447 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 FOXB2Q5VYV0 432 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 ACAD11Q709F0 780 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 ARHGAP24Q8N264 748 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 TNKS2Q9H2K2 1166 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 DPPA5A6NC42 116 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 TMEM233B4DJY2 109 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 SMIM24O75264 130 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 SNUPNO95149 360 aaKnown RBP12.1□□□□□ -0.47
ITGB1-202ENST00000396033 IGSF6O95976 241 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 GKP32189 559 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 PGM1P36871 562 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 TTPAP49638 278 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 PEX6Q13608 980 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 PTPRNQ16849 979 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 LYSMD3Q7Z3D4 306 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 YIPF3Q9GZM5 350 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 DENND2DQ9H6A0 471 aaPredicted RBP12.1□□□□□ -0.47
ITGB1-202ENST00000396033 ABCB8Q9NUT2 735 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.1□□□□□ -0.47
ITGB1-202ENST00000396033 MAPK8P45983 427 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 TBC1D25Q3MII6 688 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 DNAL1Q4LDG9 190 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 AARS2Q5JTZ9 985 aaKnown RBP12.1□□□□□ -0.47
ITGB1-202ENST00000396033 WASHC2DQ5SRD0 308 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 RPS27LQ71UM5 84 aaKnown RBP12.1□□□□□ -0.47
ITGB1-202ENST00000396033 TAS2R42Q7RTR8 314 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 PHTF2Q8N3S3 785 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 KDM1BQ8NB78 822 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 PIH1D2Q8WWB5 315 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 RPL10LQ96L21 214 aaKnown RBP12.1□□□□□ -0.47
ITGB1-202ENST00000396033 EML4Q9HC35 981 aaKnown RBP12.1□□□□□ -0.47
ITGB1-202ENST00000396033 INTS6Q9UL03 887 aaKnown RBP12.1□□□□□ -0.47
ITGB1-202ENST00000396033 FIS1Q9Y3D6 152 aa12.1□□□□□ -0.47
ITGB1-202ENST00000396033 PRAMEF12O95522 483 aa12.09□□□□□ -0.47
ITGB1-202ENST00000396033 CCND1P24385 295 aa12.09□□□□□ -0.47
ITGB1-202ENST00000396033 KCNC1P48547 511 aa12.09□□□□□ -0.47
ITGB1-202ENST00000396033 COPAP53621 1224 aa12.09□□□□□ -0.47
ITGB1-202ENST00000396033 ARHGAP15Q53QZ3 475 aa12.09□□□□□ -0.47
ITGB1-202ENST00000396033 METTL21CQ5VZV1 264 aa12.09□□□□□ -0.47
ITGB1-202ENST00000396033 NXNQ6DKJ4 435 aa12.09□□□□□ -0.47
ITGB1-202ENST00000396033 METTL3Q86U44 580 aaKnown RBP12.09□□□□□ -0.47
ITGB1-202ENST00000396033 MMADHCQ9H3L0 296 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms