RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CLDN7O95471 211 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 ASMTLO95671 621 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 RPLP0P05388 317 aaKnown RBP13.69□□□□□ -0.22
CXCL12-205ENST00000395794 IVLP07476 585 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 PNLIPP16233 465 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 PCBP4P57723 403 aaKnown RBP13.69□□□□□ -0.22
CXCL12-205ENST00000395794 ERVPABLB-1P60509 514 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 SKOR1P84550 965 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 ZBTB17Q13105 803 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 LCE2DQ5TA82 110 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-205ENST00000395794 KAZNQ674X7 775 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 FOXR1Q6PIV2 292 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 OGFOD3Q6PK18 319 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 MFSD7Q6UXD7 560 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 NPNTQ6UXI9 565 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 RFLNAQ6ZTI6 216 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 PDZD3Q86UT5 571 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 CCNJLQ8IV13 435 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 CCDC50Q8IVM0 306 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 RCOR2Q8IZ40 523 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 ARL14Q8N4G2 192 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 CNTD1Q8N815 330 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 Q8N9G6 341 aaPredicted RBP13.69□□□□□ -0.22
CXCL12-205ENST00000395794 ZNF248Q8NDW4 579 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 CCL4L1Q8NHW4 92 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 WDR36Q8NI36 951 aaKnown RBP13.69□□□□□ -0.22
CXCL12-205ENST00000395794 GPBAR1Q8TDU6 330 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 TFB1MQ8WVM0 346 aaKnown RBP13.69□□□□□ -0.22
CXCL12-205ENST00000395794 P3H4Q92791 437 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 SCAMP4Q969E2 229 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 MRFAP1L1Q96HT8 127 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 HIC2Q96JB3 615 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 CALR3Q96L12 384 aaKnown RBP13.69□□□□□ -0.22
CXCL12-205ENST00000395794 SMIM14Q96QK8 99 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 PANX2Q96RD6 677 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 LYSMD1Q96S90 227 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 RIOK2Q9BVS4 552 aaKnown RBP13.69□□□□□ -0.22
CXCL12-205ENST00000395794 CEP41Q9BYV8 373 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 SLC25A51Q9H1U9 297 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 FAM83DQ9H4H8 585 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 LRIT1Q9P2V4 623 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 APPL1Q9UKG1 709 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 SATB2Q9UPW6 733 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 SLC17A4Q9Y2C5 497 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 ENTPD2Q9Y5L3 495 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 GOLGA4Q13439 2230 aaKnown RBP13.69□□□□□ -0.22
CXCL12-205ENST00000395794 CFAP47Q6ZTR5 3102 aa13.69□□□□□ -0.22
CXCL12-205ENST00000395794 ANKRD11Q6UB99 2663 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-205ENST00000395794 ANKRD36A6QL64 1941 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 CCDC187A0A096LP49 1063 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 A0A0A6YYK5 440 aaPredicted RBP13.68□□□□□ -0.22
CXCL12-205ENST00000395794 A0A0U1RQS6 177 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 RHPN2P1A8MT19 583 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 MTSS1O43312 755 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 NUDT21O43809 227 aaKnown RBP13.68□□□□□ -0.22
CXCL12-205ENST00000395794 CST8O60676 142 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 DXOO77932 396 aaKnown RBP13.68□□□□□ -0.22
CXCL12-205ENST00000395794 PRLP01236 227 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 CDKN2BP42772 138 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 POLD2P49005 469 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 ZNF75DP51815 510 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 NAP1L1P55209 391 aaKnown RBP13.68□□□□□ -0.22
CXCL12-205ENST00000395794 CCL7P80098 99 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 IHHQ14623 411 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 QPCTQ16769 361 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 TFDP3Q5H9I0 405 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 CERCAMQ5T4B2 595 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 SLC30A9Q6PML9 568 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 SPOCD1Q6ZMY3 1216 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 KDELC2Q7Z4H8 507 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 DAAM2Q86T65 1068 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 GALNT13Q8IUC8 556 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 TMTC1Q8IUR5 882 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 ZDHHC1Q8WTX9 485 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 IMP4Q96G21 291 aaKnown RBP13.68□□□□□ -0.22
CXCL12-205ENST00000395794 RBM41Q96IZ5 413 aaKnown RBP13.68□□□□□ -0.22
CXCL12-205ENST00000395794 TMEM74Q96NL1 305 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 OLFM3Q96PB7 478 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 OR2M4Q96R27 311 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 SRPK1Q96SB4 655 aaKnown RBP13.68□□□□□ -0.22
CXCL12-205ENST00000395794 LRRN3Q9H3W5 708 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 RAD18Q9NS91 495 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 TAAR2Q9P1P5 351 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 TMEM98Q9Y2Y6 226 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 PCDHGA8Q9Y5G5 932 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 DSPP15924 2871 aaKnown RBP13.68□□□□□ -0.22
CXCL12-205ENST00000395794 CHD6Q8TD26 2715 aa13.68□□□□□ -0.22
CXCL12-205ENST00000395794 PKD1L2Q7Z442 2459 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 NTN3O00634 580 aaPredicted RBP13.67□□□□□ -0.22
CXCL12-205ENST00000395794 INPP4BO15327 924 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 NOBOXO60393 691 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 MMP2P08253 660 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 ADCY8P40145 1251 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 SPINT3P49223 89 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 INHBCP55103 352 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 CTBSQ01459 385 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 CDK18Q07002 472 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
CXCL12-205ENST00000395794 EIF3IQ13347 325 aaKnown RBP13.67□□□□□ -0.22
CXCL12-205ENST00000395794 LRP8Q14114 963 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms