RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 CBX4O00257 560 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 GPC4O75487 556 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 CDK14O94921 469 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 LPOP22079 712 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ACADVLP49748 655 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ARF5P84085 180 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ARHGEF6Q15052 776 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 RBBP5Q15291 538 aaKnown RBP15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 KIAA1841Q6NSI8 718 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 RAB44Q7Z6P3 723 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 STAG3L4Q8TBR4 150 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 PPP2R3CQ969Q6 453 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 WBP2Q969T9 261 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 NPAS2Q99743 824 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 DDX50Q9BQ39 737 aaKnown RBP15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 C6orf203Q9P0P8 240 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 PACSIN3Q9UKS6 424 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 VPS9D1Q9Y2B5 631 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 ASB3Q9Y575 518 aa15.29■□□□□ 0.04
UBE2D3-207ENST00000394801 MAGEA13PA6NCF6 341 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 CFLARO15519 480 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 PQBP1O60828 265 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 KERAO60938 352 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 ATP6V0D1P61421 351 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 MS4A2Q01362 244 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 LRP8Q14114 963 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 FASTKQ14296 549 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 RNF219Q5W0B1 726 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 CLEC6AQ6EIG7 209 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 ZFP1Q6P2D0 407 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 TMEM154Q6P9G4 183 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 PAQR3Q6TCH7 311 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 GK5Q6ZS86 529 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 RYBPQ8N488 228 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 ADGRE3Q9BY15 652 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 GPBP1L1Q9HC44 474 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 OAS3Q9Y6K5 1087 aaKnown RBP15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 UBXN8O00124 270 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 ACOT8O14734 319 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 NDUFS3O75489 264 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 BCAS2O75934 225 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 RHOBTB1O94844 696 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 LATS1O95835 1130 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 SOD2P04179 222 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 ALDH1A3P47895 512 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 CCL23P55773 120 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 FLOT2Q14254 428 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 INO80DQ53TQ3 878 aaPredicted RBP15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 THEMIS2Q5TEJ8 643 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■■■□ 20.8
UBE2D3-207ENST00000394801 TMEM126BQ8IUX1 230 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 MFN1Q8IWA4 741 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 GDPD5Q8WTR4 605 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 C19orf60Q96EN9 201 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 BIRC8Q96P09 236 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 VCXQ9H320 206 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 HIPK3Q9H422 1215 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 CACNA2D2Q9NY47 1150 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 YIPF1Q9Y548 306 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 PCDHGC4Q9Y5F7 938 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 PCDHGA7Q9Y5G6 932 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 DNAJC15Q9Y5T4 150 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 TANC1Q9C0D5 1861 aa15.28■□□□□ 0.04
UBE2D3-207ENST00000394801 UBA6A0AVT1 1052 aaPredicted RBP15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 C2orf78A6NCI8 922 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 EIF4E1BA6NMX2 242 aaKnown RBP15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 H7C0S8 307 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 TSPAN3O60637 253 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 SRP72O76094 671 aaKnown RBP15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 SIX3O95343 332 aaPredicted RBP15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 TSPAN8P19075 237 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 FMO4P31512 558 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 CDH13P55290 713 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 PKNOX1P55347 436 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 PFKFB4Q16877 469 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 LPCAT4Q643R3 524 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 NCEH1Q6PIU2 408 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 HERC6Q8IVU3 1022 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 PQLC1Q8N2U9 271 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 LPCAT1Q8NF37 534 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 DLG3Q92796 817 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 MUC3BQ9H195 1237 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 CCDC68Q9H2F9 335 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 PAPOLBQ9NRJ5 636 aaKnown RBP15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 GBF1Q92538 1859 aa15.27■□□□□ 0.04
UBE2D3-207ENST00000394801 ANAPC1Q9H1A4 1944 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 MICAL3Q7RTP6 2002 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 FBP2O00757 339 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 TMCC1O94876 653 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 UPP2O95045 317 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 C1RP00736 705 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 SNRPB2P08579 225 aaKnown RBP15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 ARSAP15289 507 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 CLCN4P51793 760 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 PSME3P61289 254 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 AGKQ53H12 422 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 SFT2D3Q587I9 215 aa15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 OGFRL1Q5TC84 451 aaPredicted RBP15.27■□□□□ 0.03
UBE2D3-207ENST00000394801 C16orf59Q7L2K0 433 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms