RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 TMEM135Q86UB9 458 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 NLGN4XQ8N0W4 816 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 MCPH1Q8NEM0 835 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 ACER1Q8TDN7 264 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 JPH3Q8WXH2 748 aaPredicted RBP17.08■□□□□ 0.32
PTPA-207ENST00000393370 GPR22Q99680 433 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 TTYH2Q9BSA4 534 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.32
PTPA-207ENST00000393370 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 LRRC4Q9HBW1 653 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 CYP4F12Q9HCS2 524 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 FAM118AQ9NWS6 357 aa17.08■□□□□ 0.32
PTPA-207ENST00000393370 SLC1A7O00341 560 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 MTSS1O43312 755 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 DGAT1O75907 488 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 SOAT2O75908 522 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 FKBP9O95302 570 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 HTR3AP46098 478 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 APLP1P51693 650 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 DGCR6Q14129 220 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 CRY1Q16526 586 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 RABL3Q5HYI8 236 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 ZNF280DQ6N043 979 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 PIWIL4Q7Z3Z4 852 aaKnown RBP17.07■□□□□ 0.32
PTPA-207ENST00000393370 GLRX5Q86SX6 157 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 SLC41A1Q8IVJ1 513 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 CCDC28AQ8IWP9 274 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 BEST2Q8NFU1 509 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 TMEM143Q96AN5 459 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 MASTLQ96GX5 879 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 GPR78Q96P69 363 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 VPS35Q96QK1 796 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 BCL7BQ9BQE9 202 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 XYLT2Q9H1B5 865 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 USP22Q9UPT9 525 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 NAALAD2Q9Y3Q0 740 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 PCM1Q15154 2024 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 K7ERI5 159 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 LRIG2O94898 1065 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 STBD1O95210 358 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 MAP2K4P45985 399 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 GSK3BP49841 420 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 KIF19Q2TAC6 998 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 Q5BKY6 102 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
PTPA-207ENST00000393370 WDR49Q8IV35 697 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 TMEM130Q8N3G9 435 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 TMBIM1Q969X1 311 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 BIRC7Q96CA5 298 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 YIPF6Q96EC8 236 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 AMBRA1Q9C0C7 1298 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 FBXO28Q9NVF7 368 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 STMN3Q9NZ72 180 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 FAM198AQ9UFP1 575 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 KCNN3Q9UGI6 736 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 KIAA1257Q9ULG3 409 aa17.07■□□□□ 0.32
PTPA-207ENST00000393370 AP3D1O14617 1153 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 XPNPEP2O43895 674 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 FMO4P31512 558 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 NR2C2P49116 596 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 ATXN1P54253 815 aaKnown RBP17.06■□□□□ 0.32
PTPA-207ENST00000393370 POU6F1Q14863 301 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 TJAP1Q5JTD0 557 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 ZNF772Q68DY9 489 aaPredicted RBP17.06■□□□□ 0.32
PTPA-207ENST00000393370 NCBP2-AS2Q69YL0 99 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 CLEC6AQ6EIG7 209 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 PRMT9Q6P2P2 845 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 TXNDC11Q6PKC3 985 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 CUZD1Q86UP6 607 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 DNAJB14Q8TBM8 379 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 RORBQ92753 470 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 LRRC58Q96CX6 371 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 HSFY1Q96LI6 401 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 ZNF717Q9BY31 904 aaPredicted RBP17.06■□□□□ 0.32
PTPA-207ENST00000393370 SLC7A5P2Q9GIP4 190 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 ALG2Q9H553 416 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 FBXO5Q9UKT4 447 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 A0A0G2JMP0 313 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 SAGE2PA6NJ88 616 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 CD4P01730 458 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 BMP1P13497 986 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 ACVR2AP27037 513 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 IL12AP29459 219 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 OR2B6P58173 313 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 FAM214AQ32MH5 1076 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 NXNL2Q5VZ03 156 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 LARP4Q71RC2 724 aaKnown RBP eCLIP17.06■□□□□ 0.321e-6■■■□□ 18.7
PTPA-207ENST00000393370 ZC3HC1Q86WB0 502 aaKnown RBP17.06■□□□□ 0.32
PTPA-207ENST00000393370 GAD1Q99259 594 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 SMURF2Q9HAU4 748 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 VANGL2Q9ULK5 521 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 PCDHA9Q9Y5H5 950 aa17.06■□□□□ 0.32
PTPA-207ENST00000393370 BBIP1A8MTZ0 92 aa17.05■□□□□ 0.32
PTPA-207ENST00000393370 ANGPT2O15123 496 aa17.05■□□□□ 0.32
PTPA-207ENST00000393370 MDM4O15151 490 aa17.05■□□□□ 0.32
PTPA-207ENST00000393370 ZW10O43264 779 aa17.05■□□□□ 0.32
PTPA-207ENST00000393370 PCNAP12004 261 aa17.05■□□□□ 0.32
PTPA-207ENST00000393370 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
PTPA-207ENST00000393370 RRM2P31350 389 aa17.05■□□□□ 0.32
PTPA-207ENST00000393370 SFNP31947 248 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms