RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CNTNAP3Q9BZ76 1288 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 SLC13A1Q9BZW2 595 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 GBA3Q9H227 469 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 CYP4F12Q9HCS2 524 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 BPIFA1Q9NP55 256 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 SIRPGQ9P1W8 387 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 SPASTQ9UBP0 616 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 FAM153AQ9UHL3 310 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 ANGPTL2Q9UKU9 493 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 TMEM98Q9Y2Y6 226 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZNF711Q9Y462 761 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 PCYT1BQ9Y5K3 369 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 U3KQA8 63 aa7.65□□□□□ -1.18
HMGB3P1-201ENST00000393368 LRRK1Q38SD2 2015 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRPM6Q9BX84 2022 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 FADS2P1A8MWK0 482 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 C1QTNF9BB2RNN3 333 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 YY2O15391 372 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 BUD23O43709 281 aaKnown RBP7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 USP12O75317 370 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 RFPL3O75679 317 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 DKK1O94907 266 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 NDST3O95803 873 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 AGTP01019 485 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 C1QTNF9P0C862 333 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 ALPPL2P10696 532 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 MYCLP1P12525 358 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 CTSEP14091 401 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZNF30P17039 623 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 CXCR5P32302 372 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRIM23P36406 574 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 CETN2P41208 172 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 GNPDA1P46926 289 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 SPINT3P49223 89 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 RPL26P61254 145 aaKnown RBP7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 DAB2P98082 770 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 SPARCL1Q14515 664 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 PTPRCAPQ14761 206 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 RPS6KA1Q15418 735 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 SEL1L2Q5TEA6 688 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 GUSBP11Q6P575 273 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 KYQ8NBH2 561 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 OR56A4Q8NGH8 313 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 C1orf54Q8WWF1 131 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 ADAMTS14Q8WXS8 1223 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 FCRL5Q96RD9 977 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 LYSMD1Q96S90 227 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 TEX101Q9BY14 249 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 TMEM168Q9H0V1 697 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 CARS2Q9HA77 564 aaKnown RBP7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZFYVE1Q9HBF4 777 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 USP29Q9HBJ7 922 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 PHPT1Q9NRX4 125 aaPredicted RBP7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 NLGN3Q9NZ94 848 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 DNPEPQ9ULA0 475 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 RPL26L1Q9UNX3 145 aaKnown RBP7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 APOBEC2Q9Y235 224 aaKnown RBP7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 EFR3BQ9Y2G0 817 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 PRKAB1Q9Y478 270 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 PLEKHM1Q9Y4G2 1056 aa7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 OAS3Q9Y6K5 1087 aaKnown RBP7.64□□□□□ -1.19
HMGB3P1-201ENST00000393368 LOC285095A0A1B0GVY8 99 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 PRSS38A1L453 326 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 GOLGA6L9A6NEM1 432 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 NEMP2A6NFY4 417 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 B4DGG1 531 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 TOR1BO14657 336 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 GPR39O43194 453 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 MTSS1O43312 755 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 METTL18O95568 372 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 ASMTLO95671 621 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 TNFP01375 233 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 ATP1A1P05023 1023 aaKnown RBP7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 CEACAM5P06731 702 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 ANXA6P08133 673 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 HOXB3P14651 431 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 ETS1P14921 441 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 CKMT2P17540 419 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 AK4P27144 223 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 SHC2P98077 582 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 DPTQ07507 201 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 SNX1Q13596 522 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 SLC1A5Q15758 541 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 SLC14A2Q15849 920 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 HS1BP3Q53T59 392 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 ITPRIPL1Q6GPH6 555 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 ADAMTSL4Q6UY14 1074 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 EFL1Q7Z2Z2 1120 aaKnown RBP7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 TMC3Q7Z5M5 1100 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 SLC13A5Q86YT5 568 aaPredicted RBP7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 SLC35F3Q8IY50 421 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 GPR26Q8NDV2 337 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 SLC35B2Q8TB61 432 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 BLOC1S5Q8TDH9 187 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 BTN2A2Q8WVV5 523 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 SPATA13Q96N96 652 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 ALS2CR12Q96Q35 445 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 VAT1Q99536 393 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 TMEM121Q9BTD3 319 aa7.63□□□□□ -1.19
HMGB3P1-201ENST00000393368 FSD1LQ9BXM9 530 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms