RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 DNAJC11Q9NVH1 559 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 SCOCQ9UIL1 159 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 NEMP2A6NFY4 417 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 PPEF2O14830 753 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 TGDSO95455 350 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 ITGA2BP08514 1039 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 SLC14A2Q15849 920 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 GRAMD1BQ3KR37 738 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 LIPMQ5VYY2 423 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 SULT1C3Q6IMI6 304 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 C22orf39Q6P5X5 142 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 PACS1Q6VY07 963 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 SPATA19Q7Z5L4 167 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 TCF7L2Q9NQB0 619 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 ASF1AQ9Y294 204 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 FCF1Q9Y324 198 aaKnown RBP8.09□□□□□ -1.11
ATXN3-203ENST00000393287 SCN4AP35499 1836 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 COL4A1P02462 1669 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 PRAMEF11O60813 436 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 CALCAP01258 141 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 DRD1P21728 446 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 GUCA1AP43080 201 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-203ENST00000393287 NRLP54845 237 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATXN3-203ENST00000393287 SHHQ15465 462 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 AP5B1Q2VPB7 878 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 FAM171BQ6P995 826 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 GPRIN3Q6ZVF9 776 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 FAM124AQ86V42 546 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 IL12RB2Q99665 862 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 MIOSQ9NXC5 875 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 RABGEF1Q9UJ41 708 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 FSBPO95073 299 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 TYRP14679 529 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 H2AFXP16104 143 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-203ENST00000393287 KCNA5P22460 613 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 GTF2E2P29084 291 aaKnown RBP8.09□□□□□ -1.11
ATXN3-203ENST00000393287 NKX3-2P78367 333 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 SCAPQ12770 1279 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 HSF5Q4G112 596 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-203ENST00000393287 SLC9A4Q6AI14 798 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 KIAA1161Q6NSJ0 714 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 FBXL22Q6P050 247 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 ZNF567Q8N184 647 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 SPOCK2Q92563 424 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 HDAC10Q969S8 669 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 LINGO1Q96FE5 620 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 ADPRHL2Q9NX46 363 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 CDH7Q9ULB5 785 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 NDUFAF1Q9Y375 327 aa8.09□□□□□ -1.11
ATXN3-203ENST00000393287 ERN1O75460 977 aaKnown RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 EDN1P05305 212 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ADAM17P78536 824 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ACTN3Q08043 901 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 GALNT2Q10471 571 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 FRG1Q14331 258 aaKnown RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ACAP2Q15057 778 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 PITRM1Q5JRX3 1037 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 BNC2Q6ZN30 1099 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 TAF8Q7Z7C8 310 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 SLC9B2Q86UD5 537 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 TRIM69Q86WT6 500 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CMASQ8NFW8 434 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 TTLL2Q9BWV7 592 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CCSER2Q9H7U1 834 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 BPIFA1Q9NP55 256 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ZDHHC3Q9NYG2 299 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 COG5Q9UP83 839 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CHKBQ9Y259 395 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 GSAPA4D1B5 854 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 TRIM43BA6NCK2 446 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CCDC166P0CW27 439 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 PSMC3P17980 439 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 HOXC13P31276 330 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 AVPR1BP47901 424 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 HSPA14Q0VDF9 509 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 BMPR2Q13873 1038 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 INO80DQ53TQ3 878 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 RTP2Q5QGT7 225 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 WLSQ5T9L3 541 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CYP4Z2PQ8N1L4 340 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 OR7D4Q8NG98 312 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 SCAMP5Q8TAC9 235 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 BTN2A2Q8WVV5 523 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 TRIM43Q96BQ3 446 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 PGAP3Q96FM1 320 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 SEMA4AQ9H3S1 761 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CCDC154A6NI56 674 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ISM1B1AKI9 464 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 PDE9AO76083 593 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 KCNH1O95259 989 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 HOXB2P14652 356 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 ASMTP46597 345 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 STXBP1P61764 594 aaKnown RBP8.08□□□□□ -1.12
ATXN3-203ENST00000393287 HECTD2Q5U5R9 776 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 KRT73Q86Y46 540 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 VN1R2Q8NFZ6 395 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 NELL1Q92832 810 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 IRF2BPLQ9H1B7 796 aa8.08□□□□□ -1.12
ATXN3-203ENST00000393287 CYP4F12Q9HCS2 524 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms