RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 PANX3Q96QZ0 392 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 TMPRSS4Q9NRS4 437 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 TMLHEQ9NVH6 421 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 ZNHIT2Q9UHR6 403 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 GRIP1Q9Y3R0 1128 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 YES1P07947 543 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 CREB1P16220 341 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 RORCP51449 518 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 GNA13Q14344 377 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 AFTPHQ6ULP2 937 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 GMCL1P1Q8NEA9 526 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 OR52J3Q8NH60 311 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 MUC13Q9H3R2 512 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 KAT8Q9H7Z6 458 aaKnown RBP16.13■□□□□ 0.17
SHANK1-204ENST00000391814 IFT80Q9P2H3 777 aaPredicted RBP16.13■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF232Q9UNY5 417 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 WWP2O00308 870 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 OTCP00480 354 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 SLC6A2P23975 617 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 GPR180Q86V85 440 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 RAD51AP1Q96B01 352 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 HAVCR1Q96D42 359 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 INTS10Q9NVR2 710 aaKnown RBP16.13■□□□□ 0.17
SHANK1-204ENST00000391814 PPM1HQ9ULR3 514 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 ISPDA4D126 451 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 CTXN3Q4LDR2 81 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 TTC29Q8NA56 475 aaPredicted RBP16.13■□□□□ 0.17
SHANK1-204ENST00000391814 CD101Q93033 1021 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 SMARCD1Q96GM5 515 aa16.13■□□□□ 0.17
SHANK1-204ENST00000391814 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.13■□□□□ 0.17
SHANK1-204ENST00000391814 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF286BP0CG31 522 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 ZNF157P51786 506 aaPredicted RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 XKR6Q5GH73 641 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 UNC93B1Q9H1C4 597 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 CHMP1AQ9HD42 196 aaPredicted RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 CCDC177Q9NQR7 707 aaPredicted RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 MFHAS1Q9Y4C4 1052 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 CHST10O43529 356 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 UGT2B17O75795 530 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 APOL3O95236 402 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 VARSP26640 1264 aaKnown RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 HNRNPH3P31942 346 aaKnown RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 RAB15P59190 212 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 GALNT12Q8IXK2 581 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 CNTD1Q8N815 330 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 ELL3Q9HB65 397 aaPredicted RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 AASDHPPTQ9NRN7 309 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 MTRRQ9UBK8 725 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 ITSN1Q15811 1721 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 C5orf60A6NFR6 353 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 H7C4K7 107 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 TNFRSF11BO00300 401 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 TBX10O75333 385 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 RPN2P04844 631 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 FOXN2P32314 431 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 ICAM3P32942 547 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 IDNKQ5T6J7 187 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 PDSS2Q86YH6 399 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 PHF13Q86YI8 300 aaPredicted RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 CYP4X1Q8N118 509 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 SPERTQ8NA61 448 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 COL26A1Q96A83 441 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 POLR1EQ9GZS1 481 aaKnown RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 RHBGQ9H310 441 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 PRDM8Q9NQV8 689 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 NRXN1Q9ULB1 1477 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 HIST1H2ABP04908 130 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 ABL2P42684 1182 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 PTGIRP43119 386 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 DCDC1P59894 354 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 FAM171BQ6P995 826 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 DOK6Q6PKX4 331 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 HIST3H2AQ7L7L0 130 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 FBXO16Q8IX29 292 aaPredicted RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 STK40Q8N2I9 435 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 HIST1H2ACQ93077 130 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 LINGO1Q96FE5 620 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 ZCCHC11Q5TAX3 1644 aaKnown RBP16.12■□□□□ 0.17
SHANK1-204ENST00000391814 DLC1Q96QB1 1528 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 IFNA7P01567 189 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 LINGO3P0C6S8 592 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 CHRNA5P30532 468 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 MAN2A2P49641 1150 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 ZBED5Q49AG3 693 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 CERCAMQ5T4B2 595 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 MAP4K3Q8IVH8 894 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 SVOPLQ8N434 492 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 LZTR1Q8N653 840 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 SPON1Q9HCB6 807 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 NDOR1Q9UHB4 597 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 SALL4Q9UJQ4 1053 aa16.12■□□□□ 0.17
SHANK1-204ENST00000391814 SLC30A4O14863 429 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 SNX4O95219 450 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 SLC9A3P48764 834 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 TCEA2Q15560 299 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 ARHGAP15Q53QZ3 475 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 ART5Q96L15 291 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 HPF1Q9NWY4 346 aa16.11■□□□□ 0.17
SHANK1-204ENST00000391814 FBXO9Q9UK97 447 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms