RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 CSTF3Q12996 717 aaKnown RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SEMA3BQ13214 749 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 PPIGQ13427 754 aaKnown RBP eCLIP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 BFSP2Q13515 415 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 BYSLQ13895 437 aaKnown RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CCNIQ14094 377 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 RCN2Q14257 317 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 FGFBP1Q14512 234 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CRYMQ14894 314 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TNIP1Q15025 636 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 PDK1Q15118 436 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TAF7Q15545 349 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 FAM187BQ17R55 369 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SMU1Q2TAY7 513 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TBRG1Q3YBR2 411 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TTC31Q49AM3 519 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 GLE1Q53GS7 698 aaKnown RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 LBHQ53QV2 105 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 LRIF1Q5T3J3 769 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TEDDM1Q5T9Z0 273 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 C6orf163Q5TEZ5 329 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 WDR93Q6P2C0 686 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 ACSM6Q6P461 480 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TEX38Q6PEX7 206 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 GJB7Q6PEY0 223 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 C11orf88Q6PI97 169 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SHC4Q6S5L8 630 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 MOXD1Q6UVY6 613 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 KDELC1Q6UW63 502 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CHST3Q7LGC8 479 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SPATA19Q7Z5L4 167 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CAMKMTQ7Z624 323 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 ANKRD13BQ86YJ7 626 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 PEX5LQ8IYB4 626 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SPARTQ8N0X7 666 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CCAR2Q8N163 923 aaKnown RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 VPS52Q8N1B4 723 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 FBXW8Q8N3Y1 598 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 OTUD6BQ8N6M0 293 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TC2NQ8N9U0 490 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TNIP2Q8NFZ5 429 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 OR52E1Q8NGJ3 308 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 B4GALNT2Q8NHY0 566 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CHURC1Q8WUH1 139 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TEKT4Q8WW24 435 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CNOT9Q92600 299 aaKnown RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 ZNF622Q969S3 477 aaKnown RBP eCLIP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TRIM44Q96DX7 344 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SAAL1Q96ER3 474 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SAT2Q96F10 170 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CEP295NLQ96MC4 621 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 C16orf45Q96MC5 204 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 HS6ST2Q96MM7 605 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CCDC43Q96MW1 224 aaKnown RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CTAGE1Q96RT6 745 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 MMS19Q96T76 1030 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 C1QTNF5Q9BXJ0 243 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TRIM31Q9BZY9 425 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CIPCQ9C0C6 399 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TSPY26PQ9H489 355 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 PLK3Q9H4B4 646 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 PLEKHA4Q9H4M7 779 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 MBNL1Q9NR56 388 aaKnown RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SIRT3Q9NTG7 399 aaPredicted RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 MTMR10Q9NXD2 777 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 HAO2Q9NYQ3 351 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 TAS2R3Q9NYW6 316 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SEPT10Q9P0V9 454 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 CDH22Q9UJ99 828 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 MOSPD1Q9UJG1 213 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 FBXL5Q9UKA1 691 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 BAG5Q9UL15 447 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 SHOC2Q9UQ13 582 aa2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 DHX29Q7Z478 1369 aaKnown RBP2.2□□□□□ -2.06
SNORA40.19-201ENST00000390846 ATP8B3O60423 1300 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 ASTN2O75129 1339 aaPredicted RBP2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 TBC1D3DA0A087WVF3 549 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 TBC1D3IA0A087WXS9 549 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 TBC1D3EA0A087X179 549 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 TBC1D3KA0A087X1G2 549 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 A0A0A0MQY5 61 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 GPR75-ASB3A0A0A6YYF3 556 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 TBC1D3BA6NDS4 549 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 FAM90A10PA6NDY2 464 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 TBC1D3FA6NER0 549 aaPredicted RBP2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 KDM4EB2RXH2 506 aaPredicted RBP2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 KCNJ18B7U540 433 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 TBC1D3LB9A6J9 549 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 NPIPB11E5RHQ5 1161 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 AP4M1O00189 453 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 ZNF263O14978 683 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 ST8SIA3O43173 380 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 PRDM1O75626 825 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 AKAP3O75969 853 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 LETM1O95202 739 aaPredicted RBP2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 SNX4O95219 450 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 HEXAP06865 529 aa2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 ABCB1P08183 1280 aaPredicted RBP2.19□□□□□ -2.06
SNORA40.19-201ENST00000390846 NPSP0C0P6 89 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms