RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 SIRPB2Q5JXA9 342 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 IL23RQ5VWK5 629 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 KIAA0930Q6ICG6 404 aaPredicted RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 RANBP10Q6VN20 620 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 TAS2R42Q7RTR8 314 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 PGAM4Q8N0Y7 254 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 FUBP3Q96I24 572 aaKnown RBP eCLIP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 SMOC2Q9H3U7 446 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 CCSER2Q9H7U1 834 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 CAAP1Q9H8G2 361 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 TNFRSF12AQ9NP84 129 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 DDX18Q9NVP1 670 aaKnown RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 GMPR2Q9P2T1 348 aaKnown RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 ANGPT2O15123 496 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 SRP72O76094 671 aaKnown RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 BAIAP3O94812 1187 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 GRIA3P42263 894 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 MAGEA12P43365 314 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 MSLNQ13421 630 aaPredicted RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 C16orf59Q7L2K0 433 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 LRRC43Q8N309 656 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 C2CD4AQ8NCU7 369 aaPredicted RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 C8orf48Q96LL4 319 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 CRISPLD2Q9H0B8 497 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 CWH43Q9H720 699 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 SMPD4Q9NXE4 827 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 PRPF19Q9UMS4 504 aaKnown RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 SCML2Q9UQR0 700 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 OR6C75A6NL08 312 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 CLPTM1O96005 669 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 CHRM3P20309 590 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 DPP6P42658 865 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 KCNQ1P51787 676 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 CHN2P52757 468 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 CDKN2DP55273 166 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 TWF1Q12792 350 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 EIF4EBP2Q13542 120 aaPredicted RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 HNRNPDQ14103 355 aaKnown RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 VPS26BQ4G0F5 336 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 LIN52Q52LA3 116 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 MS4A13Q5J8X5 152 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 MRNIPQ6NTE8 343 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 OTOP2Q7RTS6 562 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 MIPOL1Q8TD10 442 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 SH3RF2Q8TEC5 729 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 LPGAT1Q92604 370 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 CIB1Q99828 191 aa12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 MRPL9Q9BYD2 267 aaKnown RBP12.07□□□□□ -0.48
CAPRIN1-202ENST00000389645 RNF103-CHMP3A0A140T963 221 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 FAM149AA5PLN7 773 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 TRIM43BA6NCK2 446 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 HOXA2O43364 376 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 GOT2P00505 430 aaKnown RBP12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 COL6A2P12110 1019 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 NAT1P18440 290 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 ITGB6P18564 788 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 CES1P23141 567 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 GALK1P51570 392 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 CLCN5P51795 746 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 NANOGNBQ7Z5D8 188 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 MYO1HQ8N1T3 1032 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 BBS5Q8N3I7 341 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 TRIML2Q8N7C3 387 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 LRTOMTQ8WZ04 291 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 TRIM43Q96BQ3 446 aaPredicted RBP12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 NSUN5Q96P11 429 aaKnown RBP12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 TSGA13Q96PP4 275 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 SPATA7Q9P0W8 599 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 RNF112Q9ULX5 631 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 A0A0D9SEW6 157 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 DYTNA2CJ06 578 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 CD3EAPO15446 510 aaKnown RBP12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 TBC1D4O60343 1298 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 TLR5O60602 858 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 TIPRLO75663 272 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 SERPINF2P08697 491 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 ATF6P18850 670 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 KCNC1P48547 511 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 TLR1Q15399 786 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 RBBP7Q16576 425 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 ZRANB3Q5FWF4 1079 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 MTX3Q5HYI7 312 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 LPCAT1Q8NF37 534 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 SEZ6LQ9BYH1 1024 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 POLR1EQ9GZS1 481 aaKnown RBP12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 FBXO44Q9H4M3 255 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 CROTQ9UKG9 612 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 AP4S1Q9Y587 144 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 CCDC162PA2VCL2 907 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 A8MX80 341 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 MT-ND1P03886 318 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 SNRPB2P08579 225 aaKnown RBP12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 CLTBP09497 229 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 CKMT2P17540 419 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 PRKAA2P54646 552 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 PLOD1Q02809 727 aaPredicted RBP12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 MAPRE2Q15555 327 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 FBXL19Q6PCT2 694 aa12.06□□□□□ -0.48
CAPRIN1-202ENST00000389645 ANKS3Q6ZW76 656 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms