RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 C18orf8Q96DM3 657 aa0.5□□□□□ -2.33
RNU6-880P-201ENST00000384526 RIPOR3Q96MK2 946 aa0.5□□□□□ -2.33
RNU6-880P-201ENST00000384526 MTERF1Q99551 399 aaKnown RBP0.5□□□□□ -2.33
RNU6-880P-201ENST00000384526 CLSTN3Q9BQT9 956 aa0.5□□□□□ -2.33
RNU6-880P-201ENST00000384526 PANK3Q9H999 370 aa0.5□□□□□ -2.33
RNU6-880P-201ENST00000384526 CORO2BQ9UQ03 480 aa0.5□□□□□ -2.33
RNU6-880P-201ENST00000384526 EXO1Q9UQ84 846 aaKnown RBP0.5□□□□□ -2.33
RNU6-880P-201ENST00000384526 VSIG4Q9Y279 399 aa0.5□□□□□ -2.33
RNU6-880P-201ENST00000384526 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
RNU6-880P-201ENST00000384526 SPRR5A0A1B0GTR4 108 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 FAM90A18PA6NE21 464 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 FAM90A16PA6NEW6 464 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 FAM90A9PA6NNJ1 464 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 HSPB2A8KAH6 182 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 FAM90A5PA8MXJ8 464 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 EIF3DO15371 548 aaKnown RBP eCLIP0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 AP2A2O94973 939 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 CLDN1O95832 211 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 NGFP01138 241 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 FAM90A15PP0C7V4 464 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 FAM90A14PP0C7W9 464 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 CSF2RAP15509 400 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 POLR2CP19387 275 aaPredicted RBP0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 RYKP34925 604 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 RPS6KA3P51812 740 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 AMPD3Q01432 767 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 SP3Q02447 781 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 PIN1Q13526 163 aaPredicted RBP0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 ARHGEF6Q15052 776 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 HSPB2Q16082 182 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 AP5B1Q2VPB7 878 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 RINT1Q6NUQ1 792 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 MTSS1LQ765P7 747 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 ZBED8Q8IZ13 594 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 SETD9Q8NE22 299 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 SLC38A5Q8WUX1 472 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 TMEM170AQ8WVE7 144 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 HMGB4Q8WW32 186 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 GTF3AQ92664 365 aaKnown RBP0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 SNAPC3Q92966 411 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 ARRDC3Q96B67 414 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 PLA2G12AQ9BZM1 189 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 CLPBQ9H078 707 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 FAM204AQ9H8W3 233 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 SEPSECSQ9HD40 501 aaKnown RBP0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 MAN2B2Q9Y2E5 1009 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 A3GALT2U3KPV4 340 aa0.49□□□□□ -2.33
RNU6-880P-201ENST00000384526 TENM1Q9UKZ4 2725 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 FLT1P17948 1338 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 C5orf60A6NFR6 353 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 CBY3A6NI87 242 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 KPNA7A9QM74 516 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 TRAFD1O14545 582 aaPredicted RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 KLK8O60259 260 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 ADAP00813 363 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 SERPINC1P01008 464 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 G6PDP11413 515 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 GNAZP19086 355 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 CD58P19256 250 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 DDIT3P35638 169 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 GJC1P36383 396 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 GSCP56915 257 aaPredicted RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 MBTD1Q05BQ5 628 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 ZNF543Q08ER8 600 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 HNRNPDQ14103 355 aaKnown RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 KIAA0753Q2KHM9 967 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 BTBD16Q32M84 506 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 EIPR1Q53HC9 387 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 ARHGEF16Q5VV41 709 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 CES5AQ6NT32 575 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 CCDC149Q6ZUS6 474 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 CHST15Q7LFX5 561 aaPredicted RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 ADGRD2Q7Z7M1 963 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 SUMF1Q8NBK3 374 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 RBM15BQ8NDT2 890 aaKnown RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 KIR2DL5BQ8NHK3 375 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 PPP1R13BQ96KQ4 1090 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 MGME1Q9BQP7 344 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 RTP3Q9BQQ7 232 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 YTHDF1Q9BYJ9 559 aaKnown RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 KCNN2Q9H2S1 579 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 SPC25Q9HBM1 224 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 ZBTB20Q9HC78 741 aaPredicted RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 DDX4Q9NQI0 724 aaKnown RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 LIN7CQ9NUP9 197 aaKnown RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 RNF186Q9NXI6 227 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 DNAJB4Q9UDY4 337 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 MUTYHQ9UIF7 546 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 TMA7Q9Y2S6 64 aaKnown RBP0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 NFE2L3Q9Y4A8 694 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 SNX13Q9Y5W8 968 aa0.48□□□□□ -2.33
RNU6-880P-201ENST00000384526 GIMAP1-GIMAP5A0A087WTJ2 511 aa0.47□□□□□ -2.33
RNU6-880P-201ENST00000384526 POM121BA6NF01 834 aa0.47□□□□□ -2.33
RNU6-880P-201ENST00000384526 PLOD2O00469 737 aa0.47□□□□□ -2.33
RNU6-880P-201ENST00000384526 HNRNPRO43390 633 aaKnown RBP0.47□□□□□ -2.33
RNU6-880P-201ENST00000384526 PDE9AO76083 593 aa0.47□□□□□ -2.33
RNU6-880P-201ENST00000384526 HRGP04196 525 aa0.47□□□□□ -2.33
RNU6-880P-201ENST00000384526 CYC1P08574 325 aa0.47□□□□□ -2.33
RNU6-880P-201ENST00000384526 CYP21A2P08686 494 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms