RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 IL26Q9NPH9 171 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 RRAGDQ9NQL2 400 aaPredicted RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 SLC2A6Q9UGQ3 507 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 RAB23Q9ULC3 237 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 FNDC3AQ9Y2H6 1198 aaKnown RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 TCAF1Q9Y4C2 921 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 PLXNA2O75051 1894 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 TNRC6BQ9UPQ9 1833 aaKnown RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 CCL22O00626 93 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 NDC80O14777 642 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 PPFIA2O75334 1257 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 SLU7O95391 586 aaKnown RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 PCCBP05166 539 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 IGFALSP35858 605 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 RACK1P63244 317 aaKnown RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 DPTQ07507 201 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 TEX35Q5T0J7 233 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 HENMT1Q5T8I9 393 aaKnown RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 PEAR1Q5VY43 1037 aaPredicted RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 ALS2CLQ60I27 953 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 ESRP1Q6NXG1 681 aaKnown RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 PNCKQ6P2M8 343 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 GCNT7Q6ZNI0 430 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 MICALCLQ6ZW33 695 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 ZNF765Q7L2R6 523 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 SYT12Q8IV01 421 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 PDIK1LQ8N165 341 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 DENND6BQ8NEG7 585 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 PPHLN1Q8NEY8 458 aaKnown RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 OR13J1Q8NGT2 312 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 FBXO25Q8TCJ0 367 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 LOXL4Q96JB6 756 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 TRIM56Q9BRZ2 755 aaKnown RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 KIFC1Q9BW19 673 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 FRMD8Q9BZ67 464 aaPredicted RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 SEMA4AQ9H3S1 761 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 AASDHPPTQ9NRN7 309 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 ZDHHC18Q9NUE0 388 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 NLE1Q9NVX2 485 aaPredicted RBP12.62□□□□□ -0.39
SMN1-202ENST00000380707 KCTD5Q9NXV2 234 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 HS3ST3A1Q9Y663 406 aa12.62□□□□□ -0.39
SMN1-202ENST00000380707 SCN8AQ9UQD0 1980 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 GAPDHSO14556 408 aaPredicted RBP12.61□□□□□ -0.39
SMN1-202ENST00000380707 FPGTO14772 594 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 BCAT2O15382 392 aaPredicted RBP12.61□□□□□ -0.39
SMN1-202ENST00000380707 EPN2O95208 641 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 SOD1P00441 154 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 WNT1P04628 370 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 PSMA3P25788 255 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 CD38P28907 300 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 ARSDP51689 593 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 ARL4CP56559 192 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 DCDC1P59894 354 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 CAV1Q03135 178 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 DHX9Q08211 1270 aaKnown RBP12.61□□□□□ -0.39
SMN1-202ENST00000380707 LAMB3Q13751 1172 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 STAT4Q14765 748 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 HIF1AQ16665 826 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 SKIDA1Q1XH10 827 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 BBS9Q3SYG4 887 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 HP1BP3Q5SSJ5 553 aaPredicted RBP12.61□□□□□ -0.39
SMN1-202ENST00000380707 TSTD2Q5T7W7 516 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 LAIR1Q6GTX8 287 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 CASC4Q6P4E1 433 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 CES3Q6UWW8 571 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 LAYNQ6UX15 382 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 ABI3BPQ7Z7G0 1075 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 NLRP8Q86W28 1048 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 IGDCC3Q8IVU1 814 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 STYXQ8WUJ0 223 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 IFT81Q8WYA0 676 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 PLEKHG4BQ96PX9 1271 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 C19orf43Q9BQ61 176 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 SPATA16Q9BXB7 569 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 CDH19Q9H159 772 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 ARRDC1-AS1Q9H2J1 176 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 SUDS3Q9H7L9 328 aaPredicted RBP12.61□□□□□ -0.39
SMN1-202ENST00000380707 GDF3Q9NR23 364 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 FAM114A2Q9NRY5 505 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 RAD18Q9NS91 495 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 NFKBIL1Q9UBC1 381 aaPredicted RBP12.61□□□□□ -0.39
SMN1-202ENST00000380707 FKBPLQ9UIM3 349 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 SOX13Q9UN79 622 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 OR1A2Q9Y585 309 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 DMXL1Q9Y485 3027 aa12.61□□□□□ -0.39
SMN1-202ENST00000380707 A0A1W2PR77 199 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 FADS2P1A8MWK0 482 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 GPR39O43194 453 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 NMBRP28336 390 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 TRIM23P36406 574 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 SPAM1P38567 509 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 HADHAP40939 763 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 CARSP49589 748 aaKnown RBP12.6□□□□□ -0.39
SMN1-202ENST00000380707 CSNK1EP49674 416 aaKnown RBP12.6□□□□□ -0.39
SMN1-202ENST00000380707 AFF3P51826 1226 aaKnown RBP12.6□□□□□ -0.39
SMN1-202ENST00000380707 XIAPP98170 497 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 PEX6Q13608 980 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 CCDC6Q16204 474 aa12.6□□□□□ -0.39
SMN1-202ENST00000380707 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms