RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 GNB5O14775 395 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 POP4O95707 220 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 HPGDP15428 266 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 GLRA2P23416 452 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.911e-6■■■□□ 16.4
PTPRA-204ENST00000380393 GPC5P78333 572 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 GRIK2Q13002 908 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 ART3Q13508 389 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 PARP15Q460N3 678 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 CREB3L2Q70SY1 520 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 VN1R5Q7Z5H4 357 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 OR8H3Q8N146 312 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 DHRSXQ8N5I4 330 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 MCFD2Q8NI22 146 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 SLC35C1Q96A29 364 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 RCN3Q96D15 328 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 OR52B2Q96RD2 323 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 GMLQ99445 158 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 EYA3Q99504 573 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 COA1Q9GZY4 146 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 FBXL12Q9NXK8 326 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 DERAQ9Y315 318 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 PCDHGA9Q9Y5G4 932 aaKnown RBP9.36□□□□□ -0.91
PTPRA-204ENST00000380393 PTPRFP10586 1907 aa9.36□□□□□ -0.91
PTPRA-204ENST00000380393 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 ZBTB14O43829 449 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 FABP1P07148 127 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 NR3C2P08235 984 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 ZSCAN5DPP0CG00 497 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 PSMA3P25788 255 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 FLI1Q01543 452 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 GPS1Q13098 491 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CCINQ13939 588 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 GRIK4Q16099 956 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 GPAT3Q53EU6 434 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 PDSS1Q5T2R2 415 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 MPP7Q5T2T1 576 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 COMMD7Q86VX2 200 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 RAB43Q86YS6 212 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 NLGN4XQ8N0W4 816 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 OR4D10Q8NGI6 311 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 OR13J1Q8NGT2 312 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 OR8K5Q8NH50 307 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 OR52N1Q8NH53 320 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 OLIG1Q8TAK6 271 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 PHOSPHO2Q8TCD6 241 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 SLC5A11Q8WWX8 675 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 HERPUD2Q9BSE4 406 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 ALOXE3Q9BYJ1 711 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 YTHDF1Q9BYJ9 559 aaKnown RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 SOX17Q9H6I2 414 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 ZFP14Q9HCL3 533 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CD320Q9NPF0 282 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 KCNH7Q9NS40 1196 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 NUFIP1Q9UHK0 495 aaKnown RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 HSPB11Q9Y547 144 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 COL4A5P29400 1685 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 NFKBIEO00221 500 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 DLGAP1O14490 977 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 SNAPINO95295 136 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CDK1P06493 297 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 FCER2P06734 321 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 ELK4P28324 431 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 MEOX2P50222 304 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 SP2Q02086 613 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 TCP10Q12799 353 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CIAPIN1Q6FI81 312 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CYP2R1Q6VVX0 501 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CEP68Q76N32 757 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CATSPER4Q7RTX7 472 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 MYCT1Q8N699 235 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 KDM1BQ8NB78 822 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 ZNF680Q8NEM1 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 ZNF778Q96MU6 729 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 REEP2Q9BRK0 252 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 DHRS4Q9BTZ2 278 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 GTPBP2Q9BX10 602 aaKnown RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 ING2Q9H160 280 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 SIX2Q9NPC8 291 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 DTX4Q9Y2E6 619 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CSADQ9Y600 493 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 CSNK1G3Q9Y6M4 447 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 SCN9AQ15858 1988 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 DICER1Q9UPY3 1922 aaKnown RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L15C9J2P7 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 ZNF623O75123 536 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 MYCLP12524 364 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 GARSP41250 739 aaKnown RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 KPNA2P52292 529 aaKnown RBP9.35□□□□□ -0.91
PTPRA-204ENST00000380393 MAP2K6P52564 334 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
PTPRA-204ENST00000380393 BAMBIQ13145 260 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms