RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CDH23	Q9H251	3354 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	GREB1	Q4ZG55	1949 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	STX7	O15400	261 aa	Known RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	PRPF4	O43172	522 aa	Known RBP eCLIP	11.68	□□□□□ -0.54	3e-8	■□□□□ 10.6
LMO7-204	ENST00000377499	KRT36	O76013	467 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CRTAM	O95727	393 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	MMP2	P08253	660 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	GLRB	P48167	497 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	ERVK-21	P61565	698 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	CTC1	Q2NKJ3	1217 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	PLEKHG6	Q3KR16	790 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	TAF1B	Q53T94	588 aa	Predicted RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	ARTN	Q5T4W7	220 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499		Q6ZNB5	142 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	DTX3	Q8N9I9	347 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	DCAF4L2	Q8NA75	395 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	LEMD2	Q8NC56	503 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	IRF7	Q92985	503 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	FERD3L	Q96RJ6	166 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	TBC1D14	Q9P2M4	693 aa		11.68	□□□□□ -0.54
LMO7-204	ENST00000377499	FAM32A	Q9Y421	112 aa	Known RBP	11.68	□□□□□ -0.54
LMO7-204	ENST00000377499		A0A096LPK6	155 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	TRIM24	O15164	1050 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	ALDH1A2	O94788	518 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	PRKACB	P22694	351 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	ARL1	P40616	181 aa	Predicted RBP	11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	CTSO	P43234	321 aa	Predicted RBP	11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	MSLN	Q13421	630 aa	Predicted RBP	11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	PTPRR	Q15256	657 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	RASA2	Q15283	850 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	C5orf22	Q49AR2	442 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	KHDC1	Q4VXA5	237 aa	Known RBP	11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	ARMC12	Q5T9G4	340 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	PDE12	Q6L8Q7	609 aa	Known RBP	11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	TAS2R42	Q7RTR8	314 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	SLC41A1	Q8IVJ1	513 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	CALML6	Q8TD86	181 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	STMN2	Q93045	179 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	FEM1C	Q96JP0	617 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	MAGEB18	Q96M61	343 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	MECR	Q9BV79	373 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	ACE2	Q9BYF1	805 aa	Predicted RBP	11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	ZDHHC6	Q9H6R6	413 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	PDF	Q9HBH1	243 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	SLCO1B3	Q9NPD5	702 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	SNX15	Q9NRS6	342 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	ZDHHC7	Q9NXF8	308 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	FBXO5	Q9UKT4	447 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	FADS3	Q9Y5Q0	445 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	TM9SF1	O15321	606 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	CACNG3	O60359	315 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	PIGN	O95427	931 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	GLP2R	O95838	553 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	IGSF6	O95976	241 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	BGN	P21810	368 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	TCEA1	P23193	301 aa	Known RBP	11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	SERPINB8	P50452	374 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	RELA	Q04206	551 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	OVGP1	Q12889	678 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	GRM3	Q14832	879 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	ZRANB3	Q5FWF4	1079 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	GRIN3A	Q8TCU5	1115 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	RBBP8	Q99708	897 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	MGME1	Q9BQP7	344 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	SPHK2	Q9NRA0	654 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	NSMCE4A	Q9NXX6	385 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	ITGB1BP2	Q9UKP3	347 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	GRID1	Q9ULK0	1009 aa		11.67	□□□□□ -0.54
LMO7-204	ENST00000377499	C5orf67	F2Z3F1	127 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	TYROBP	O43914	113 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	RFPL1	O75677	317 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	CDK4	P11802	303 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	ATP6V1B1	P15313	513 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	POLR2E	P19388	210 aa	Known RBP	11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	FSHR	P23945	695 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	RAD51	Q06609	339 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	BNIP1	Q12981	228 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	NAB1	Q13506	487 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	POM121L1P	Q3SYA9	428 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	PITRM1	Q5JRX3	1037 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	CDHR3	Q6ZTQ4	885 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	YAF2	Q8IY57	180 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	SPATA6L	Q8N4H0	392 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	SCAI	Q8N9R8	606 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	OR4K2	Q8NGD2	314 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	UTP4	Q969X6	686 aa	Known RBP	11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	ACD	Q96AP0	544 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	ASIC4	Q96FT7	647 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	MANSC1	Q9H8J5	431 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	SLC8A2	Q9UPR5	921 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	SLC9A3R1	O14745	358 aa	Predicted RBP	11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	FOXN2	P32314	431 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	SLC1A2	P43004	574 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	CD300C	Q08708	224 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	IHH	Q14623	411 aa		11.66	□□□□□ -0.54
LMO7-204	ENST00000377499	RAB30	Q15771	203 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms