RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 OR4D1Q15615 310 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 TMEM150AQ86TG1 271 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 PELI3Q8N2H9 469 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 PTGR2Q8N8N7 351 aaPredicted RBP20.17■□□□□ 0.82
VSX1-202ENST00000376709 RHEBL1Q8TAI7 183 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 BHMTQ93088 406 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 TRIM43Q96BQ3 446 aaPredicted RBP20.17■□□□□ 0.82
VSX1-202ENST00000376709 ZFRQ96KR1 1074 aaKnown RBP20.17■□□□□ 0.82
VSX1-202ENST00000376709 TCF12Q99081 682 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 SPG21Q9NZD8 308 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 STOML2Q9UJZ1 356 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 PLXNA4Q9HCM2 1894 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 H3BMM5 538 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 UBXN8O00124 270 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 CD160O95971 181 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 ACRP10323 421 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 TRAF2Q12933 501 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 ART3Q13508 389 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 CDH18Q13634 790 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 PFKFB4Q16877 469 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 CLEC6AQ6EIG7 209 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 HJURPQ8NCD3 748 aaPredicted RBP20.17■□□□□ 0.82
VSX1-202ENST00000376709 EFCAB1Q9HAE3 211 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 MRGBPQ9NV56 204 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 VPS9D1Q9Y2B5 631 aa20.17■□□□□ 0.82
VSX1-202ENST00000376709 GBF1Q92538 1859 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 GFAPP14136 432 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 RHOAP61586 193 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 EML3Q32P44 896 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 UNC50Q53HI1 259 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 ANO7Q6IWH7 933 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 PAQR3Q6TCH7 311 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 BNC2Q6ZN30 1099 aaPredicted RBP20.16■□□□□ 0.82
VSX1-202ENST00000376709 KBTBD2Q8IY47 623 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 ARL14EPQ8N8R7 260 aaPredicted RBP20.16■□□□□ 0.82
VSX1-202ENST00000376709 TMA16Q96EY4 203 aaKnown RBP20.16■□□□□ 0.82
VSX1-202ENST00000376709 FEM1AQ9BSK4 669 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 TFB2MQ9H5Q4 396 aaKnown RBP20.16■□□□□ 0.82
VSX1-202ENST00000376709 BPIFA1Q9NP55 256 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 FKBPLQ9UIM3 349 aa20.16■□□□□ 0.82
VSX1-202ENST00000376709 UBDO15205 165 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 PFDN6O15212 129 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 STX7O15400 261 aaKnown RBP20.15■□□□□ 0.82
VSX1-202ENST00000376709 LATS1O95835 1130 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 ENO3P13929 434 aaPredicted RBP20.15■□□□□ 0.82
VSX1-202ENST00000376709 LAG3P18627 525 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 MC4RP32245 332 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 CDKN1CP49918 316 aaPredicted RBP20.15■□□□□ 0.82
VSX1-202ENST00000376709 CDH13P55290 713 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 RAD51Q06609 339 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 BLMHQ13867 455 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 GEN1Q17RS7 908 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 TXNDC8Q6A555 127 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 TCEAL8Q8IYN2 117 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 ZNF184Q99676 751 aaPredicted RBP20.15■□□□□ 0.82
VSX1-202ENST00000376709 C11orf49Q9H6J7 331 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 ZNF334Q9HCZ1 680 aaPredicted RBP20.15■□□□□ 0.82
VSX1-202ENST00000376709 CCDC189A1A4V9 331 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 CFLARO15519 480 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 GPC4O75487 556 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 SIX3O95343 332 aaPredicted RBP20.15■□□□□ 0.82
VSX1-202ENST00000376709 TIMP1P01033 207 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 HDCP19113 662 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 TTPAP49638 278 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 PPP1R3AQ16821 1122 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 PTPRNQ16849 979 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 INO80DQ53TQ3 878 aaPredicted RBP20.15■□□□□ 0.82
VSX1-202ENST00000376709 NCEH1Q6PIU2 408 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 CHSY3Q70JA7 882 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 CMTR2Q8IYT2 770 aaKnown RBP20.15■□□□□ 0.82
VSX1-202ENST00000376709 ATOH8Q96SQ7 321 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 CDRT15Q96T59 188 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 STK39Q9UEW8 545 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 PACSIN3Q9UKS6 424 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 RNF112Q9ULX5 631 aa20.15■□□□□ 0.82
VSX1-202ENST00000376709 FCF1Q9Y324 198 aaKnown RBP20.15■□□□□ 0.82
VSX1-202ENST00000376709 SUPT3HB4E1H0 165 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 SUPT3HO75486 399 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 SPATA31D3P0C874 917 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 ARSAP15289 507 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 CA8P35219 290 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 INHBCP55103 352 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 ZRANB3Q5FWF4 1079 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 PSAPL1Q6NUJ1 521 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 SPATA31D4Q6ZUB0 917 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 DDX53Q86TM3 631 aaKnown RBP20.14■□□□□ 0.81
VSX1-202ENST00000376709 ITIH5Q86UX2 942 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 PIANPQ8IYJ0 282 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 PGAM4Q8N0Y7 254 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 PLCD3Q8N3E9 789 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 STAG3L4Q8TBR4 150 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 ASB2Q96Q27 587 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 GPR21Q99679 349 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 DERL2Q9GZP9 239 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 WDR41Q9HAD4 459 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 MRPL17Q9NRX2 175 aaKnown RBP20.14■□□□□ 0.81
VSX1-202ENST00000376709 LHX3Q9UBR4 397 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 LRCH1Q9Y2L9 728 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 MED16Q9Y2X0 877 aa20.14■□□□□ 0.81
VSX1-202ENST00000376709 PCDHB9Q9Y5E1 797 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms