RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CCDC28BQ9BUN5 200 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TNFRSF12AQ9NP84 129 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 EBF1Q9UH73 591 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 EIF2B4Q9UI10 523 aaKnown RBP14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GPR39O43194 453 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 VPS26AO75436 327 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 APLP1P51693 650 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 C21orf59P57076 290 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GNA12Q03113 381 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PGS1Q32NB8 556 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ANKRD46Q86W74 232 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CPNE9Q8IYJ1 553 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 METTL25Q8N6Q8 603 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ELMO1Q92556 727 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PLK2Q9NYY3 685 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 WWOXQ9NZC7 414 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KLQ9UEF7 1012 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 USP22Q9UPT9 525 aa14.36□□□□□ -0.11
TNFRSF1B-201ENST00000376259 NIPSNAP2O75323 286 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZNF157P51786 506 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CRYBB1P53674 252 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 IST1P53990 364 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CDKN2DP55273 166 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 RPL38P63173 70 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 RHDQ02161 417 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CDK18Q07002 472 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ACBD5Q5T8D3 534 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SMG8Q8ND04 991 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ATP13A1Q9HD20 1204 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LRFN2Q9ULH4 789 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 COL4A5P29400 1685 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 NDST2P52849 883 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PTPRRQ15256 657 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LSMEM2Q8N112 164 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ATP6V0D2Q8N8Y2 350 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZFAND2BQ8WV99 257 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GLMNQ92990 594 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ASIC4Q96FT7 647 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ADAMTS10Q9H324 1103 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 VPS45Q9NRW7 570 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PADI3Q9ULW8 664 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SMIM35A0A1B0GVV1 85 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TTC36A6NLP5 189 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 F5H5T6 163 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 M0R3G1 203 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 HTRA2O43464 458 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TLR5O60602 858 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PRDX6P30041 224 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MAGEA6P43360 314 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 AP5B1Q2VPB7 878 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 NOL9Q5SY16 702 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GPSM1Q86YR5 675 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OR4L1Q8NH43 312 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SERPINB11Q96P15 392 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 C9orf16Q9BUW7 83 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 NMUR1Q9HB89 426 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 DERAQ9Y315 318 aa14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 RBMX2Q9Y388 322 aaKnown RBP14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 MAGED1Q9Y5V3 778 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SDK1Q7Z5N4 2213 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 C2orf81A6NN90 581 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZNF195O14628 629 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 IRAK2O43187 625 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 BCL10O95999 233 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 IL1BP01584 269 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 WARSP23381 471 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CCNCP24863 283 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PSMB9P28065 219 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PGFP49763 221 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PRKAA2P54646 552 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 UFM1P61960 85 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CLCQ05315 142 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TAF10Q12962 218 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 CPSF6Q16630 551 aaKnown RBP eCLIP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TRIM16LQ309B1 348 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZNF555Q8NEP9 628 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZC3H15Q8WU90 426 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LINGO1Q96FE5 620 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 ZYG11BQ9C0D3 744 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 POLR1EQ9GZS1 481 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 HS3ST4Q9Y661 456 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TBC1D4O60343 1298 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KPNA6O60684 536 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 GPR32O75388 356 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PRKACGP22612 351 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PATL1Q86TB9 770 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 LRRTM3Q86VH5 581 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SIDT2Q8NBJ9 832 aaKnown RBP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 STAG3L4Q8TBR4 150 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KIFC1Q9BW19 673 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KATNAL1Q9BW62 490 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 NFKBIZQ9BYH8 718 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 PCDH12Q9NPG4 1184 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 RIC8BQ9NVN3 520 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 KIF17Q9P2E2 1029 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 POLR3HQ9Y535 204 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SHROOM3Q8TF72 1996 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 SEC22BO75396 215 aa14.34□□□□□ -0.11
TNFRSF1B-201ENST00000376259 OCM2P0CE71 109 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms