RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ZNF567Q8N184 647 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 ABHD11Q8NFV4 315 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 OR10T2Q8NGX3 314 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 EDEM1Q92611 657 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 LRCH3Q96II8 777 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 ZNF641Q96N77 438 aaPredicted RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 HGH1Q9BTY7 390 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 C9orf16Q9BUW7 83 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 SEZ6LQ9BYH1 1024 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 TNFRSF12AQ9NP84 129 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 CD320Q9NPF0 282 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 HCSTQ9UBK5 93 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 PSME2Q9UL46 239 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 TMA7Q9Y2S6 64 aaKnown RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 TSC2P49815 1807 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 JRKO75564 520 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 RASAL1O95294 804 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 INHAP05111 366 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 S100A1P23297 94 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 BDNFP23560 247 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 OXTRP30559 389 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 HPCAL1P37235 193 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 CCT8P50990 548 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 MPP1Q00013 466 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 IFRD2Q12894 506 aaPredicted RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 BFSP2Q13515 415 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 FAM45BPQ6NSW5 357 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 SPRED1Q7Z699 444 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 RNF180Q86T96 592 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 KCNMB4Q86W47 210 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 DHRSXQ8N5I4 330 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 FAM45AQ8TCE6 357 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 PSD2Q9BQI7 771 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 NACA2Q9H009 215 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 OSBPL2Q9H1P3 480 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 DNMT3BQ9UBC3 853 aaKnown RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 EGFL7Q9UHF1 273 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 SNX10Q9Y5X0 201 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 UBDO15205 165 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 PFDN6O15212 129 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 NRP2O60462 931 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 SEC14L2O76054 403 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 SLC35E2BP0CK96 405 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 FASP25445 335 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 CST5P28325 142 aaPredicted RBP12.91□□□□□ -0.34
MSH5-204ENST00000375755 PGFP49763 221 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 ZNF460Q14592 562 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 ANO4Q32M45 955 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 PDPRQ8NCN5 879 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 USP33Q8TEY7 942 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 MYLPFQ96A32 169 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 HSFY1Q96LI6 401 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 ZNF347Q96SE7 839 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 SIAEQ9HAT2 523 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 LRRC4Q9HBW1 653 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 PIGVQ9NUD9 493 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 VANGL2Q9ULK5 521 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 TRAF6Q9Y4K3 522 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 USP3Q9Y6I4 520 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 A0A1W2PQ45 241 aaPredicted RBP12.91□□□□□ -0.34
MSH5-204ENST00000375755 A0A1W2PQY0 241 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 HACD1B0YJ81 288 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 FAM72CH0Y354 149 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 M0QYT0 321 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 MATKP42679 507 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 GSSP48637 474 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 CSE1LP55060 971 aaKnown RBP12.91□□□□□ -0.34
MSH5-204ENST00000375755 C1QTNF8P60827 252 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 USP10Q14694 798 aaKnown RBP12.91□□□□□ -0.34
MSH5-204ENST00000375755 CERCAMQ5T4B2 595 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 FAM72AQ5TYM5 149 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 FAM72DQ6L9T8 149 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 PIWIL3Q7Z3Z3 882 aaKnown RBP12.91□□□□□ -0.34
MSH5-204ENST00000375755 FAM72BQ86X60 149 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 PCSK9Q8NBP7 692 aaKnown RBP12.91□□□□□ -0.34
MSH5-204ENST00000375755 CENPNQ96H22 339 aaPredicted RBP12.91□□□□□ -0.34
MSH5-204ENST00000375755 SH3YL1Q96HL8 342 aaPredicted RBP12.91□□□□□ -0.34
MSH5-204ENST00000375755 TSNARE1Q96NA8 513 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 CGREF1Q99674 301 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 GPR22Q99680 433 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 KLHL25Q9H0H3 589 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 POU2F3Q9UKI9 436 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 ANKRD6Q9Y2G4 727 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 DGKBQ9Y6T7 804 aa12.91□□□□□ -0.34
MSH5-204ENST00000375755 NME4O00746 187 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 SNAP29O95721 258 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 GATMP50440 423 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 CLLU1OSQ5K130 101 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 ZDHHC17Q8IUH5 632 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 TXNDC5Q8NBS9 432 aaKnown RBP12.9□□□□□ -0.34
MSH5-204ENST00000375755 SCAMP5Q8TAC9 235 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 HDAC10Q969S8 669 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 ZUFSPQ96AP4 578 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 LHPPQ9H008 270 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 RAD21L1Q9H4I0 556 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 GPN2Q9H9Y4 310 aaPredicted RBP12.9□□□□□ -0.34
MSH5-204ENST00000375755 IL1RL2Q9HB29 575 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 PKD2L2Q9NZM6 624 aa12.9□□□□□ -0.34
MSH5-204ENST00000375755 SCHIP1Q9P0W5 487 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms