RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 C10orf120Q5SQS8 335 aa11.77□□□□□ -0.52
MCF2L-202ENST00000375597 UGT3A1Q6NUS8 523 aa11.77□□□□□ -0.52
MCF2L-202ENST00000375597 PAQR3Q6TCH7 311 aa11.77□□□□□ -0.52
MCF2L-202ENST00000375597 LINC00523Q86TU6 105 aa11.77□□□□□ -0.52
MCF2L-202ENST00000375597 CRYBG2Q8N1P7 616 aa11.77□□□□□ -0.52
MCF2L-202ENST00000375597 TTC39CQ8N584 583 aa11.77□□□□□ -0.52
MCF2L-202ENST00000375597 LZTR1Q8N653 840 aa11.77□□□□□ -0.52
MCF2L-202ENST00000375597 BEGAINQ9BUH8 593 aa11.77□□□□□ -0.52
MCF2L-202ENST00000375597 HPS4Q9NQG7 708 aa11.77□□□□□ -0.52
MCF2L-202ENST00000375597 EIF2B4Q9UI10 523 aaKnown RBP11.77□□□□□ -0.52
MCF2L-202ENST00000375597 NT5C1B-RDH14C9J2C7 533 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 SNX2O60749 519 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 ZNF189O75820 626 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-202ENST00000375597 LRATO95237 230 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 CLCN2P51788 898 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 CTBSQ01459 385 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 TWF1Q12792 350 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 SPIDRQ14159 915 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 MFSD10Q14728 455 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 NR6A1Q15406 480 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 OR4D1Q15615 310 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 GON4LQ3T8J9 2241 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 PAGE3Q5JUK9 113 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 C16orf59Q7L2K0 433 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 LRRTM3Q86VH5 581 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 FUNDC1Q8IVP5 155 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 TMEM151AQ8N4L1 468 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 PPTC7Q8NI37 304 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 MRGPRX2Q96LB1 330 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 MUS81Q96NY9 551 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 RERGLQ9H628 205 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 NMUR1Q9HB89 426 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 AMBNQ9NP70 447 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 TBC1D23Q9NUY8 699 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 NDUFA13Q9P0J0 144 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 LIMD1Q9UGP4 676 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 UTS2RQ9UKP6 389 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 ST3GAL5Q9UNP4 418 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 MGAMO43451 1857 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 KRT87PA6NCN2 255 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 E5RI56 91 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 PIRO00625 290 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 OR1I1O60431 355 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 CLASP2O75122 1294 aaKnown RBP11.77□□□□□ -0.53
MCF2L-202ENST00000375597 GOT2P00505 430 aaKnown RBP11.77□□□□□ -0.53
MCF2L-202ENST00000375597 POLR2IP36954 125 aaKnown RBP11.77□□□□□ -0.53
MCF2L-202ENST00000375597 GDF5P43026 501 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 GEMP55040 296 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 MERTKQ12866 999 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 MAPRE2Q15555 327 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 ARMC12Q5T9G4 340 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 SLC22A15Q8IZD6 547 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 FBXO39Q8N4B4 442 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 GIPC2Q8TF65 315 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 EGFL8Q99944 293 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 VRTNQ9H8Y1 702 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 IGSF5Q9NSI5 407 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 TRHDEQ9UKU6 1024 aa11.77□□□□□ -0.53
MCF2L-202ENST00000375597 ANKRD33BA6NCL7 494 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 H3BNH8 94 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 AZIN1O14977 448 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 NIPSNAP2O75323 286 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 NDUFS3O75489 264 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 RAD23AP54725 363 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 TSPY1Q01534 308 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 DNASE1L3Q13609 305 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 PABPC1LQ4VXU2 614 aaKnown RBP11.76□□□□□ -0.53
MCF2L-202ENST00000375597 TBPL2Q6SJ96 375 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 CHERPQ8IWX8 916 aaKnown RBP11.76□□□□□ -0.53
MCF2L-202ENST00000375597 SLC15A3Q8IY34 581 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 RNF168Q8IYW5 571 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-202ENST00000375597 NPLOC4Q8TAT6 608 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 CMTM6Q9NX76 183 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 SMPD4Q9NXE4 827 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 PCDHGC4Q9Y5F7 938 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 PSME4Q14997 1843 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 HS6ST1O60243 411 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 OR4F21O95013 312 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 SLC2A3P11169 496 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 CD52P31358 61 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 THPOP40225 353 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 OR1G1P47890 313 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 EIF2B2P49770 351 aaKnown RBP11.76□□□□□ -0.53
MCF2L-202ENST00000375597 KPNA2P52292 529 aaKnown RBP11.76□□□□□ -0.53
MCF2L-202ENST00000375597 CBX3Q13185 183 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 SIM2Q14190 667 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-202ENST00000375597 RAB39AQ14964 217 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 PGS1Q32NB8 556 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 EGFLAMQ63HQ2 1017 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 PNPT1Q8TCS8 783 aaKnown RBP11.76□□□□□ -0.53
MCF2L-202ENST00000375597 DLG3Q92796 817 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 MARCH7Q9H992 704 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 EIF2B3Q9NR50 452 aaKnown RBP11.76□□□□□ -0.53
MCF2L-202ENST00000375597 SACM1LQ9NTJ5 587 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.76□□□□□ -0.53
MCF2L-202ENST00000375597 CCDC162PA2VCL2 907 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 CCDC154A6NI56 674 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 SYCE1LA8MT33 242 aa11.76□□□□□ -0.53
MCF2L-202ENST00000375597 E9PAM4 449 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms