RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CWF19L1Q69YN2 538 aaKnown RBP12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 TXNDC11Q6PKC3 985 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 PWWP2AQ96N64 755 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 ZFP14Q9HCL3 533 aa12.28□□□□□ -0.44
NPLOC4-202ENST00000374747 A0A1W2PPM1 405 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 PLOD3O60568 738 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 S100A1P23297 94 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 CD86P42081 329 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 GALK1P51570 392 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 POLR2LP62875 67 aaKnown RBP12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 SMARCB1Q12824 385 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 AFTPHQ6ULP2 937 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 CLNKQ7Z7G1 428 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 TNS4Q8IZW8 715 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 CLYBLQ8N0X4 340 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 MAGEB10Q96LZ2 347 aaPredicted RBP12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 MECRQ9BV79 373 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 Q9Y3F1 56 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 GMEB1Q9Y692 573 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 LOC110117498-PIK3R3F6TDL0 507 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 PIGRP01833 764 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 CHRNGP07510 517 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 CSH1P0DML2 217 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 CSH2P0DML3 217 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 WEE1P30291 646 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 PPM1AP35813 382 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 TTPAP49638 278 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 COPZ1P61923 177 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 MED22Q15528 200 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 HECTD3Q5T447 861 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 BICRALQ6AI39 1079 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 CDYL2Q8N8U2 506 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 ZNF557Q8N988 423 aaPredicted RBP12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 ZFP28Q8NHY6 868 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 CD101Q93033 1021 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 SLC47A1Q96FL8 570 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 SLC12A4Q9UP95 1085 aa12.27□□□□□ -0.44
NPLOC4-202ENST00000374747 OTCP00480 354 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 BPGMP07738 259 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 ENO2P09104 434 aaPredicted RBP12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 NR2F6P10588 404 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 SERPINA4P29622 427 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 CRHR2Q13324 411 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 MTX3Q5HYI7 312 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 USP45Q70EL2 814 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 GPR180Q86V85 440 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 FAR1Q8WVX9 515 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 HOPXQ9BPY8 73 aaPredicted RBP12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 EGFL7Q9UHF1 273 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 PHF11Q9UIL8 331 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 OGDHLQ9ULD0 1010 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 PCDHGC3Q9UN70 934 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 FADS3Q9Y5Q0 445 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 G3V2T6 193 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 FFAR3O14843 346 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 GPR42O15529 346 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 NOVP48745 357 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 SPIBQ01892 262 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 MTAPQ13126 283 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 LIN52Q52LA3 116 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 ZC3H12AQ5D1E8 599 aaKnown RBP12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 UTS2BQ765I0 119 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 HIPK3Q9H422 1215 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 PNPOQ9NVS9 261 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 SLC17A7Q9P2U7 560 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 PSME2Q9UL46 239 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 RAB26Q9ULW5 256 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 ARAP2Q8WZ64 1704 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 H3BNX3 289 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 HLA-DQA2P01906 255 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 CCR4P51679 360 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 AIF1P55008 147 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 RNF220Q5VTB9 566 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 PACS1Q6VY07 963 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 RNF19BQ6ZMZ0 732 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 RMI1Q9H9A7 625 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 DNMT3LQ9UJW3 386 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 VPS4AQ9UN37 437 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 COQ4Q9Y3A0 265 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 SQORQ9Y6N5 450 aa12.27□□□□□ -0.45
NPLOC4-202ENST00000374747 A0A1B0GUL6 1792 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 AREL1O15033 823 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 KHDRBS3O75525 346 aaKnown RBP12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 TM7SF2O76062 418 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 TGDSO95455 350 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 GNRH1P01148 92 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 CCNB1P14635 433 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 HNRNPLP14866 589 aaKnown RBP eCLIP12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 ERCC2P18074 760 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 EPORP19235 508 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 BRCC3P46736 316 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 SKP1P63208 163 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 PAGE2Q7Z2X7 111 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 SNX27Q96L92 541 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 TXNRD2Q9NNW7 524 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 WWP2O00308 870 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 LRIG2O94898 1065 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 PRKAG1P54619 331 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 ATP6V0D1P61421 351 aa12.26□□□□□ -0.45
NPLOC4-202ENST00000374747 PTPN20Q4JDL3 420 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms