RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 PGK2P07205 417 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 KRT7P08729 469 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 CXCL8P10145 99 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 TXNP10599 105 aaKnown RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 GHRP10912 638 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 CD58P19256 250 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 MARK3P27448 753 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 ATICP31939 592 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 CDKN2BP42772 138 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 GABRB2P47870 512 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 VCPP55072 806 aaKnown RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 NXPH1P58417 271 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 IFI35P80217 286 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 TFAMQ00059 246 aaKnown RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 SLC25A11Q02978 314 aaKnown RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 KRTAP1-1Q07627 177 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 INCA1Q0VD86 236 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 SNAPC2Q13487 334 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 GTF2H3Q13889 308 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 ITIH4Q14624 930 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 ODF1Q14990 250 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 KRT72Q14CN4 511 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 MORF4L2Q15014 288 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 RASA2Q15283 850 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 CNGA2Q16280 664 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 KCTD19Q17RG1 926 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 GRAMD1BQ3KR37 738 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 TTC31Q49AM3 519 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 PTPN20Q4JDL3 420 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 KHDC1Q4VXA5 237 aaKnown RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 LACTB2Q53H82 288 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 TFDP3Q5H9I0 405 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 ZNF667Q5HYK9 610 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 THEMIS2Q5TEJ8 643 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 GKAP1Q5VSY0 366 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 DAB2IPQ5VWQ8 1189 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 DENND1BQ6P3S1 775 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 MFSD7Q6UXD7 560 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 USP50Q70EL3 339 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 ANKS1BQ7Z6G8 1248 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 PHLDB2Q86SQ0 1253 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 EXOC3L1Q86VI1 746 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 CCDC25Q86WR0 208 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 ERICH1Q86X53 443 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 TDRPQ86YL5 185 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 RHPN2Q8IUC4 686 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 FBXO16Q8IX29 292 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 CNPY4Q8N129 248 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 OTUD6BQ8N6M0 293 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 CCDC197Q8NCU1 140 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 POC1BQ8TC44 478 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 TFAP2BQ92481 460 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 TTC17Q96AE7 1141 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 MCRS1Q96EZ8 462 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 CLMNQ96JQ2 1002 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 CFAP57Q96MR6 1250 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 MCEEQ96PE7 176 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 VRK1Q99986 396 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 VKORC1Q9BQB6 163 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 DDX23Q9BUQ8 820 aaKnown RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 HEMGNQ9BXL5 484 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 INO80BQ9C086 356 aaPredicted RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 NSRP1Q9H0G5 558 aaKnown RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 PDZD7Q9H5P4 517 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 BRD9Q9H8M2 597 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 PPCSQ9HAB8 311 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 PCDH9Q9HC56 1237 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 INTS9Q9NV88 658 aaKnown RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 DDX20Q9UHI6 824 aaKnown RBP4.93□□□□□ -1.62
USP48-202ENST00000374730 SIX4Q9UIU6 781 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 SHOC2Q9UQ13 582 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 ANKRD6Q9Y2G4 727 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 C2CD2Q9Y426 696 aa4.93□□□□□ -1.62
USP48-202ENST00000374730 WDR27A2RRH5 827 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 C3orf70A6NLC5 250 aaPredicted RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 SMIM23A6NLE4 172 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 LACTBL1A8MY62 500 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ANKRD65E5RJM6 399 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 F8VP50 259 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 B4GALT5O43286 388 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 LRCH4O75427 683 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 RBMXL2O75526 392 aaKnown RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 SOAT2O75908 522 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 OAS1P00973 400 aaKnown RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 GH1P01241 217 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 GSTA1P08263 222 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 STAG3L1P0CL83 205 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 VDRP11473 427 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 KRT3P12035 628 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 P4HA1P13674 534 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 CD19P15391 556 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 TCF4P15884 667 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 PPP3CBP16298 524 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 ATF7P17544 494 aaPredicted RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 CCND1P24385 295 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 PSMA2P25787 234 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 RFC1P35251 1148 aaPredicted RBP4.92□□□□□ -1.62
USP48-202ENST00000374730 PCK1P35558 622 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 GJC1P36383 396 aa4.92□□□□□ -1.62
USP48-202ENST00000374730 SSR1P43307 286 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms