RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 DDX50Q9BQ39 737 aaKnown RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 MAGEH1Q9H213 219 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 SUDS3Q9H7L9 328 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 COPS7BQ9H9Q2 264 aaPredicted RBP13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CATSPERZQ9NTU4 200 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 FIS1Q9Y3D6 152 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 CUL9Q8IWT3 2517 aa13.93□□□□□ -0.18
HMGCL-203ENST00000374490 DNAH12Q6ZR08 3092 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 F5H5T6 163 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 NRP2O60462 931 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 CRTAMO95727 393 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 SERPINF2P08697 491 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 CD1EP15812 388 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 OR1E1P30953 314 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 CCL23P55773 120 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 ATP6V0D1P61421 351 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 GPNMBQ14956 572 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 SPATS1Q496A3 300 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 LARP4Q71RC2 724 aaKnown RBP eCLIP13.92□□□□□ -0.18
HMGCL-203ENST00000374490 SPDYE1Q8NFV5 336 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-203ENST00000374490 ZFRQ96KR1 1074 aaKnown RBP13.92□□□□□ -0.18
HMGCL-203ENST00000374490 TCF12Q99081 682 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 SH3GL3Q99963 347 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 AARSD1Q9BTE6 412 aaKnown RBP13.92□□□□□ -0.18
HMGCL-203ENST00000374490 SPATA16Q9BXB7 569 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 MRPL9Q9BYD2 267 aaKnown RBP13.92□□□□□ -0.18
HMGCL-203ENST00000374490 TRIM15Q9C019 465 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 MTIF3Q9H2K0 278 aaKnown RBP13.92□□□□□ -0.18
HMGCL-203ENST00000374490 VCX3AQ9NNX9 186 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 MARCH4Q9P2E8 410 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-203ENST00000374490 SEPT3Q9UH03 358 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 PACSIN3Q9UKS6 424 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 TMCO1Q9UM00 188 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 VPS9D1Q9Y2B5 631 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 PRG3Q9Y2Y8 225 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-203ENST00000374490 NDUFAF1Q9Y375 327 aa13.92□□□□□ -0.18
HMGCL-203ENST00000374490 MTF2Q9Y483 593 aaPredicted RBP13.92□□□□□ -0.18
HMGCL-203ENST00000374490 E7ENX8 843 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 FBP2O00757 339 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 B4GALT3O60512 393 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 DNAJA2O60884 412 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 TNFAIP8O95379 198 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 CXCL10P02778 98 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 CSF2RAP15509 400 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 ZNF37AP17032 561 aaPredicted RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 CES1P23141 567 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 PLK1P53350 603 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 RHDQ02161 417 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 ELAVL2Q12926 359 aaKnown RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 DYNC1I2Q13409 638 aaKnown RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 MAP7D1Q3KQU3 841 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 COQ5Q5HYK3 327 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 TMEM240Q5SV17 173 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 NAIF1Q69YI7 327 aaPredicted RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 C8orf82Q6P1X6 216 aaPredicted RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 FBXL19Q6PCT2 694 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 AFTPHQ6ULP2 937 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 TMEM207Q6UWW9 146 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 MIB1Q86YT6 1006 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 NPAS4Q8IUM7 802 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 PTGR2Q8N8N7 351 aaPredicted RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 TMEM102Q8N9M5 508 aaPredicted RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 HMGCLL1Q8TB92 370 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 DNAJC1Q96KC8 554 aaKnown RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 TBATAQ96M53 351 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 CEP295NLQ96MC4 621 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 GAS2L1Q99501 681 aaPredicted RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 PKP2Q99959 881 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 MGME1Q9BQP7 344 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 MRPS26Q9BYN8 205 aaKnown RBP13.91□□□□□ -0.18
HMGCL-203ENST00000374490 ZNF696Q9H7X3 374 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 PDFQ9HBH1 243 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 TMEM181Q9P2C4 612 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 AP4S1Q9Y587 144 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 AP4B1Q9Y6B7 739 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 COMMD3-BMI1R4GMX3 469 aa13.91□□□□□ -0.18
HMGCL-203ENST00000374490 TCRBV3S1A0A5B6 114 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 CCDC162PA2VCL2 907 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 STX16-NPEPL1H3BU86 382 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 H7C4K7 107 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 PFDN6O15212 129 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 MAP3K13O43283 966 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 SLC4A1P02730 911 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 ZDHHC11BP0C7U3 371 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 PSMA3P25788 255 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 PMLP29590 882 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 SLC7A1P30825 629 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 ETFBP38117 255 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 STC1P52823 247 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 FOXM1Q08050 763 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 TAF10Q12962 218 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 TLR1Q15399 786 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 ADRM1Q16186 407 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 KANK2Q63ZY3 851 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 DEFB128Q7Z7B8 93 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 PCDH20Q8N6Y1 951 aaKnown RBP13.9□□□□□ -0.18
HMGCL-203ENST00000374490 GOLM1Q8NBJ4 401 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 OR4L1Q8NH43 312 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 BLOC1S5Q8TDH9 187 aa13.9□□□□□ -0.18
HMGCL-203ENST00000374490 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms