RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 TTKP33981 857 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 HTR7P34969 479 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 TALDO1P37837 337 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ACTR3P61158 418 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 KCNJ10P78508 379 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 CACNB2Q08289 660 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 KCNAB2Q13303 367 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 DPYSL2Q16555 572 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 TRIM16LQ309B1 348 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 TCTE1Q5JU00 501 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 MZT2AQ6P582 158 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 RIPOR1Q6ZS17 1223 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 PLD5Q8N7P1 536 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ASCC1Q8N9N2 400 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ICA1LQ8NDH6 482 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 RBM15BQ8NDT2 890 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 PPTC7Q8NI37 304 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 TANKQ92844 425 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SLC22A18Q96BI1 424 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 HPDLQ96IR7 371 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 DEPDC7Q96QD5 511 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 PEBP4Q96S96 227 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SYT17Q9BSW7 474 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 C1orf21Q9H246 121 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 STN1Q9H668 368 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SMYD3Q9H7B4 428 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 EIF2B3Q9NR50 452 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 AFF4Q9UHB7 1163 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 PLA2G4CQ9UP65 541 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SORCS3Q9UPU3 1222 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 GNEQ9Y223 722 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 PLLPQ9Y342 182 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 TRIM49D1C9J1S8 452 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ACOX3O15254 700 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SULT1C4O75897 302 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 OR7A10O76100 309 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 PFKMP08237 780 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 OSBPP22059 807 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SLC5A2P31639 672 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 DNAJA1P31689 397 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 CCR10P46092 362 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 OR1G1P47890 313 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 HIRAP54198 1017 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 AP1S2P56377 157 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SLC6A3Q01959 620 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SLC10A6Q3KNW5 377 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 FAM102AQ5T9C2 384 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SLC6A19Q695T7 634 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 DARS2Q6PI48 645 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 KYAT3Q6YP21 454 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SETD3Q86TU7 594 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 COMTD1Q86VU5 262 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 CRLF3Q8IUI8 442 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 IGDCC3Q8IVU1 814 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 KBTBD2Q8IY47 623 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ULK2Q8IYT8 1036 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 MINDY2Q8NBR6 621 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ZNF566Q969W8 418 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 MARVELD3Q96A59 401 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 PPP1R36Q96LQ0 422 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 TWNKQ96RR1 684 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 MMP19Q99542 508 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ECSITQ9BQ95 431 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 HOXD1Q9GZZ0 328 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 PLK2Q9NYY3 685 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ACTR3BQ9P1U1 418 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ANKMY1Q9P2S6 941 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 NXF1Q9UBU9 619 aaKnown RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 EVPLLA8MZ36 301 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 TARM1B6A8C7 271 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 E5RJQ4 531 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 H0YJX3 145 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 B4GALT5O43286 388 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 PLOD3O60568 738 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 CHRNA1P02708 482 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 CD48P09326 243 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 IQCF3P0C7M6 154 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ARF4P18085 180 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 CPA2P48052 419 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 CDH6P55285 790 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ARHGAP1Q07960 439 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 BST1Q10588 318 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SNX17Q15036 470 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 STEAP4Q687X5 459 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 POTEHQ6S545 545 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 IZUMO2Q6UXV1 221 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SCARA5Q6ZMJ2 495 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ADGRG6Q86SQ4 1221 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 ARID3BQ8IVW6 561 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 RXFP2Q8WXD0 754 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 OR2B2Q9GZK3 357 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 POPDC2Q9HBU9 364 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SACM1LQ9NTJ5 587 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SIRPGQ9P1W8 387 aa8.23□□□□□ -1.09
GARNL3-201ENST00000373386 SBF1O95248 1867 aa8.22□□□□□ -1.09
GARNL3-201ENST00000373386 FAM221BA6H8Z2 402 aa8.22□□□□□ -1.09
GARNL3-201ENST00000373386 ARGFXA6NJG6 315 aa8.22□□□□□ -1.09
GARNL3-201ENST00000373386 FAM159BA6NKW6 160 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms