RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 SLC39A13Q96H72 371 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 ZFP42Q96MM3 310 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 CIB1Q99828 191 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 ADI1Q9BV57 179 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.87□□□□□ -0.67
LCN2-202ENST00000372998 PCDHAC1Q9H158 963 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 ALG9Q9H6U8 611 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 SPC25Q9HBM1 224 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 PRDM5Q9NQX1 630 aaPredicted RBP10.87□□□□□ -0.67
LCN2-202ENST00000372998 TBC1D23Q9NUY8 699 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 OLAHQ9NV23 265 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 DDX18Q9NVP1 670 aaKnown RBP10.87□□□□□ -0.67
LCN2-202ENST00000372998 RNF181Q9P0P0 153 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 GMIPQ9P107 970 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 SEPT3Q9UH03 358 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 PACSIN3Q9UKS6 424 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 SNX10Q9Y5X0 201 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 HS3ST4Q9Y661 456 aa10.87□□□□□ -0.67
LCN2-202ENST00000372998 TRIP12Q14669 1992 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 CCDC78A2IDD5 438 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 FAM234BA2RU67 622 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 DRGXA6NNA5 263 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 ZNF839A8K0R7 811 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 TMEM189-UBE2V1I3L0A0 370 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 TNFRSF10BO14763 440 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 CLOCKO15516 846 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SNX2O60749 519 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 RAMP2O60895 175 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 DEAF1O75398 565 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 B3GAT3O94766 335 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 CDK14O94921 469 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 NDST3O95803 873 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 HPRP00739 348 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SERPINF2P08697 491 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 ENO2P09104 434 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 ZNF865P0CJ78 1059 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 PSMA3P25788 255 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SLC5A2P31639 672 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 CD86P42081 329 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 RANBP1P43487 201 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 CCT8P50990 548 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SLC5A3P53794 718 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 ERVK-8P63133 956 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 PLOD1Q02809 727 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 YWHAHQ04917 246 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 RING1Q06587 406 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 TOP3AQ13472 1001 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 SERINC3Q13530 473 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 NFYCQ13952 458 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 ZNF235Q14590 738 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 PCSK7Q16549 785 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SIRPB2Q5JXA9 342 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 MORN1Q5T089 497 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 GPR158Q5T848 1215 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 ARHGAP36Q6ZRI8 547 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 MOB2Q70IA6 237 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 PTAR1Q7Z6K3 402 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 DDIASQ8IXT1 998 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SLC15A3Q8IY34 581 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 FAM9CQ8IZT9 166 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 CARNMT1Q8N4J0 409 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 FAM47BQ8NA70 645 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 OR13J1Q8NGT2 312 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 OR4L1Q8NH43 312 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 HMGCLL1Q8TB92 370 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 CANT1Q8WVQ1 401 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 GAB3Q8WWW8 586 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SOCS4Q8WXH5 440 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 CASP10Q92851 521 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 BORCS5Q969J3 196 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SDCCAG3Q96C92 435 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 VPS50Q96JG6 964 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 PLEKHG4BQ96PX9 1271 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SH3GL1Q99961 368 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 KCTD14Q9BQ13 255 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 RTP3Q9BQQ7 232 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 BRINP2Q9C0B6 783 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SEMA6AQ9H2E6 1030 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 AGO3Q9H9G7 860 aaKnown RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 AIG1Q9NVV5 245 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 CHCHD3Q9NX63 227 aaKnown RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 GALNT8Q9NY28 637 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SMPD3Q9NY59 655 aaPredicted RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.86□□□□□ -0.67
LCN2-202ENST00000372998 POLG2Q9UHN1 485 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 BLOC1S6Q9UL45 172 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 RNF112Q9ULX5 631 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 TNPO3Q9Y5L0 923 aaKnown RBP10.86□□□□□ -0.67
LCN2-202ENST00000372998 GBF1Q92538 1859 aa10.86□□□□□ -0.67
LCN2-202ENST00000372998 SH3PXD2BA1X283 911 aa10.85□□□□□ -0.67
LCN2-202ENST00000372998 NEMP2A6NFY4 417 aa10.85□□□□□ -0.67
LCN2-202ENST00000372998 CCDC154A6NI56 674 aa10.85□□□□□ -0.67
LCN2-202ENST00000372998 C2orf81A6NN90 581 aa10.85□□□□□ -0.67
LCN2-202ENST00000372998 H3BSA7 217 aa10.85□□□□□ -0.67
LCN2-202ENST00000372998 NME4O00746 187 aa10.85□□□□□ -0.67
LCN2-202ENST00000372998 LDB2O43679 373 aa10.85□□□□□ -0.67
LCN2-202ENST00000372998 DUSP11O75319 330 aaKnown RBP10.85□□□□□ -0.67
LCN2-202ENST00000372998 VPS26AO75436 327 aa10.85□□□□□ -0.67
LCN2-202ENST00000372998 TIPRLO75663 272 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms