RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 RHEBL1Q8TAI7 183 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 ALG14Q96F25 216 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 SMIM14Q96QK8 99 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 RAD9AQ99638 391 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 GSTO2Q9H4Y5 243 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 HACD3Q9P035 362 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 DNMT3BQ9UBC3 853 aaKnown RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 VPS51Q9UID3 782 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 LSM7Q9UK45 103 aaKnown RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 G3BP2Q9UN86 482 aaKnown RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 LRRC42Q9Y546 428 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 SLC4A7Q9Y6M7 1214 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 ANAPC1Q9H1A4 1944 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 SDHDO14521 159 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 SUPT7LO94864 414 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 RPSAP08865 295 aaKnown RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 HERVK_113P63132 956 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 BTKQ06187 659 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 CYLC2Q14093 348 aaPredicted RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 TMEM198Q66K66 360 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 TLDC1Q6P9B6 456 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 DEFB107AQ8IZN7 70 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 EFHBQ8N7U6 833 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 DCAF4L2Q8NA75 395 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 HERVK_113Q902F9 699 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 MRPS31Q92665 395 aaKnown RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 RSRC1Q96IZ7 334 aaKnown RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 CATSPER2Q96P56 530 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 ERVK-6Q9BXR3 956 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 TFB2MQ9H5Q4 396 aaKnown RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 POLR3BQ9NW08 1133 aaPredicted RBP13.36□□□□□ -0.27
CSTF2-201ENST00000372972 ZNF510Q9Y2H8 683 aa13.36□□□□□ -0.27
CSTF2-201ENST00000372972 TLL1O43897 1013 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 FZD6O60353 706 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 TBX10O75333 385 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 MC4RP32245 332 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 TTPAP49638 278 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 PEX6Q13608 980 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 UNC50Q53HI1 259 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 HTR3DQ70Z44 454 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 RPS27LQ71UM5 84 aaKnown RBP13.35□□□□□ -0.27
CSTF2-201ENST00000372972 GAREM2Q75VX8 874 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 SNX32Q86XE0 403 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 MYLK4Q86YV6 388 aaPredicted RBP13.35□□□□□ -0.27
CSTF2-201ENST00000372972 MFN1Q8IWA4 741 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 TTC30BQ8N4P2 665 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 MAB21L3Q8N8X9 362 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 TTC16Q8NEE8 873 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 WFDC5Q8TCV5 224 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 DDI1Q8WTU0 396 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 USP13Q92995 863 aaPredicted RBP13.35□□□□□ -0.27
CSTF2-201ENST00000372972 C2orf49Q9BVC5 232 aaPredicted RBP13.35□□□□□ -0.27
CSTF2-201ENST00000372972 MEAF6Q9HAF1 191 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 ZBTB26Q9HCK0 441 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 MRGBPQ9NV56 204 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 FKBPLQ9UIM3 349 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 FCF1Q9Y324 198 aaKnown RBP13.35□□□□□ -0.27
CSTF2-201ENST00000372972 TRAF6Q9Y4K3 522 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 PCDHB9Q9Y5E1 797 aa13.35□□□□□ -0.27
CSTF2-201ENST00000372972 H3BMM5 538 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 H7C0S8 307 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 SKAP2O75563 359 aaPredicted RBP13.34□□□□□ -0.27
CSTF2-201ENST00000372972 CSPG5O95196 566 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 MT-CO1P00395 513 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 LRG1P02750 347 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 CKMP06732 381 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 PYGLP06737 847 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 CDKN1CP49918 316 aaPredicted RBP13.34□□□□□ -0.27
CSTF2-201ENST00000372972 EPHB1P54762 984 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 SESN3P58005 492 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 ERVFC1P60507 584 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 AP1S1P61966 158 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 SLC7A9P82251 487 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 CYP4F8P98187 520 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 RAD51Q06609 339 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 TBL3Q12788 808 aaKnown RBP13.34□□□□□ -0.27
CSTF2-201ENST00000372972 HERC3Q15034 1050 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 OR4D1Q15615 310 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 PTPRNQ16849 979 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 SETMARQ53H47 684 aaPredicted RBP13.34□□□□□ -0.27
CSTF2-201ENST00000372972 LILRA6Q6PI73 481 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 PAQR3Q6TCH7 311 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 RAB44Q7Z6P3 723 aaPredicted RBP13.34□□□□□ -0.27
CSTF2-201ENST00000372972 STAG3L4Q8TBR4 150 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 DTX3LQ8TDB6 740 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 BHMTQ93088 406 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 KIAA1191Q96A73 305 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 FAM136AQ96C01 138 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 BIRC8Q96P09 236 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 ASB2Q96Q27 587 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 ATOH8Q96SQ7 321 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 DERL2Q9GZP9 239 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 BPIFA1Q9NP55 256 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 TNFRSF12AQ9NP84 129 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 CDH22Q9UJ99 828 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 FAM50BQ9Y247 325 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 MED16Q9Y2X0 877 aa13.34□□□□□ -0.27
CSTF2-201ENST00000372972 FIS1Q9Y3D6 152 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms