RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 VPS28Q9UK41 221 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 CRYL1Q9Y2S2 319 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 ACOT9Q9Y305 439 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 KCTD3Q9Y597 815 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 TIMM13Q9Y5L4 95 aaPredicted RBP5.42□□□□□ -1.54
ATG4A-204ENST00000372246 RAD54BQ9Y620 910 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 QSER1Q2KHR3 1735 aa5.42□□□□□ -1.54
ATG4A-204ENST00000372246 WDR81Q562E7 1941 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SCN1AP35498 2009 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ASPDHA6ND91 283 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SOBPA7XYQ1 873 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 EEF2KO00418 725 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 MDM4O15151 490 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CNOT3O75175 753 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 MAFO75444 373 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CNTN5O94779 1100 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 C1QCP02747 245 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PIRTP0C851 137 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CYP4B1P13584 511 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CPB1P15086 417 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ZFXP17010 805 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ARF4P18085 180 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PTPRAP18433 802 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 EEF1DP29692 281 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 RPS9P46781 194 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 GSSP48637 474 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PRKAA2P54646 552 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 OR4D2P58180 307 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 IFITM2Q01629 132 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 IL1RL1Q01638 556 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 NRG1Q02297 640 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 MBTD1Q05BQ5 628 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 COL19A1Q14993 1142 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 NR6A1Q15406 480 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FXNQ16595 210 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 MOGQ16653 247 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SPANXN3Q5MJ09 141 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 GPR158Q5T848 1215 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 UBE2UQ5VVX9 321 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 NIPAL1Q6NVV3 410 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ZPBP2Q6X784 338 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CCDC81Q6ZN84 652 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SLC16A12Q6ZSM3 486 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 NEK10Q6ZWH5 1172 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SLC22A16Q86VW1 577 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 DHRSXQ8N5I4 330 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ANKFN1Q8N957 763 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CNIH3Q8TBE1 160 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FAM174AQ8TBP5 190 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 STARD8Q92502 1023 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 UBE2FQ969M7 185 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PBXIP1Q96AQ6 731 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SH3YL1Q96HL8 342 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ACOX2Q99424 681 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 KLF16Q9BXK1 252 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 IL22Q9GZX6 179 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SIK2Q9H0K1 926 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 VPS33BQ9H267 617 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 TUBB1Q9H4B7 451 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ALG2Q9H553 416 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ATP13A3Q9H7F0 1226 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 VPS45Q9NRW7 570 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 NDFIP2Q9NV92 336 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 TMEM30AQ9NV96 361 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 RABL2AQ9UBK7 228 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PGAP2Q9UHJ9 254 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CDH7Q9ULB5 785 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FZD10Q9ULW2 581 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 VPS4AQ9UN37 437 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FNDC3AQ9Y2H6 1198 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 GPSM3Q9Y4H4 160 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PMF1-BGLAPU3KQ54 211 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 UNC80Q8N2C7 3258 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ANKRD31Q8N7Z5 1873 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ZFC3H1O60293 1989 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FAM155AB1AL88 458 aaPredicted RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 DFFAO00273 331 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PIP5K1BO14986 540 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CLPXO76031 633 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ADH1CP00326 375 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 MPOP05164 745 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 CCDC159P0C7I6 412 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 TGFB3P10600 412 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 BMP2P12643 396 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 BMP4P12644 408 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SLC6A2P23975 617 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 FASP25445 335 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 MTPNP58546 118 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 MAXP61244 160 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 NCS1P62166 190 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 RACK1P63244 317 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 TUBA4AP68366 448 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ADAM17P78536 824 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 TMEM132DQ14C87 1099 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 ADRM1Q16186 407 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SMN1Q16637 294 aaKnown RBP5.41□□□□□ -1.54
ATG4A-204ENST00000372246 PHKG1Q16816 387 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SMUG1Q53HV7 270 aa5.41□□□□□ -1.54
ATG4A-204ENST00000372246 SOWAHCQ53LP3 525 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms