RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 NAB1Q13506 487 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 FLOT2Q14254 428 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 DUOXA2Q1HG44 320 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 ATAD3CQ5T2N8 411 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 IL31Q6EBC2 164 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 GTF2IRD2BQ6EKJ0 949 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 GTF2IRD2Q86UP8 949 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 CDR2LQ86X02 465 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 FBXO16Q8IX29 292 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 ZNF606Q8WXB4 792 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 DACT3Q96B18 629 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 KCTD12Q96CX2 325 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 FAM111AQ96PZ2 611 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 ASB2Q96Q27 587 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 MMP19Q99542 508 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 EBF4Q9BQW3 602 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 TRPV6Q9H1D0 765 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 C2orf40Q9H1Z8 148 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 ZFAND3Q9H8U3 227 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 FBXO8Q9NRD0 319 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 DUS2Q9NX74 493 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 IP6K2Q9UHH9 426 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 CPSF3Q9UKF6 684 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 MAPRE3Q9UPY8 281 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 ZNFX1Q9P2E3 1918 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 PSTPIP1O43586 416 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 SEC14L2O76054 403 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 KCNH1O95259 989 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 GSNP06396 782 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 PROZP22891 400 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 ARNTP27540 789 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 RPS26P62854 115 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 OLR1P78380 273 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 S100A12P80511 92 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 PTPN11Q06124 597 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 PPIL2Q13356 520 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 SURF1Q15526 300 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 FRMD7Q6ZUT3 714 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 KCTD8Q6ZWB6 473 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 RHPN2Q8IUC4 686 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 CRLF3Q8IUI8 442 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 ZCCHC7Q8N3Z6 543 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 CMASQ8NFW8 434 aaPredicted RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 CDCA5Q96FF9 252 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 HERPUD2Q9BSE4 406 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 ZDHHC3Q9NYG2 299 aa8.85□□□□□ -0.99
ATG4A-203ENST00000372232 MRPL39Q9NYK5 338 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 XPO7Q9UIA9 1087 aaKnown RBP8.85□□□□□ -0.99
ATG4A-203ENST00000372232 MN1Q10571 1320 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-203ENST00000372232 CENPXA8MT69 81 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 ACKR2O00590 384 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 KPNA6O60684 536 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 SNNO75324 88 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-203ENST00000372232 NDST3O95803 873 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 ITGB3P05106 788 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 MMP8P22894 467 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 HTR2BP41595 481 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 GPR85P60893 370 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 KLF1Q13351 362 aaPredicted RBP8.84□□□□□ -0.99
ATG4A-203ENST00000372232 BRMS1LQ5PSV4 323 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 DCUN1D2Q6PH85 259 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 VHLLQ6RSH7 139 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 MPZL3Q6UWV2 235 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 MAMDC4Q6UXC1 1216 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 SH2D5Q6ZV89 423 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 Q6ZVU0 165 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 GSTA5Q7RTV2 222 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 SNX32Q86XE0 403 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 RHOT1Q8IXI2 618 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 KATNAL2Q8IYT4 538 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 FEZF2Q8TBJ5 459 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 SLC22A8Q8TCC7 542 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 ZFP90Q8TF47 636 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 TRAPPC12Q8WVT3 735 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 ATG4AQ8WYN0 398 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 COPS5Q92905 334 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 E2F7Q96AV8 911 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 OPALINQ96PE5 141 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 HS3ST6Q96QI5 342 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 CSF3RQ99062 836 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 RTKNQ9BST9 563 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 ZCCHC2Q9C0B9 1178 aaKnown RBP8.84□□□□□ -0.99
ATG4A-203ENST00000372232 FZD8Q9H461 694 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 POLE4Q9NR33 117 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 CISHQ9NSE2 258 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 GMEB2Q9UKD1 530 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.84□□□□□ -0.99
ATG4A-203ENST00000372232 OTOFQ9HC10 1997 aa8.84□□□□□ -0.99
ATG4A-203ENST00000372232 DICER1Q9UPY3 1922 aaKnown RBP8.84□□□□□ -0.99
ATG4A-203ENST00000372232 C16orf96A6NNT2 1141 aa8.83□□□□□ -1
ATG4A-203ENST00000372232 VSTM5A8MXK1 200 aa8.83□□□□□ -1
ATG4A-203ENST00000372232 PLK4O00444 970 aa8.83□□□□□ -1
ATG4A-203ENST00000372232 TOR1AO14656 332 aa8.83□□□□□ -1
ATG4A-203ENST00000372232 SULT1B1O43704 296 aa8.83□□□□□ -1
ATG4A-203ENST00000372232 ATG13O75143 517 aa8.83□□□□□ -1
ATG4A-203ENST00000372232 BCAS2O75934 225 aaPredicted RBP8.83□□□□□ -1
ATG4A-203ENST00000372232 CDK14O94921 469 aa8.83□□□□□ -1
ATG4A-203ENST00000372232 GJB1P08034 283 aa8.83□□□□□ -1
ATG4A-203ENST00000372232 HOXC6P09630 235 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms