RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 CNGB3Q9NQW8 809 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 FAF1Q9UNN5 650 aaPredicted RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 SPTBN5Q9NRC6 3674 aaKnown RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 FAM92AA1XBS5 289 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 C2orf78A6NCI8 922 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 TCAF2A6NFQ2 919 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 TRIM64A6NGJ6 449 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 MTSS1O43312 755 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 GRAP2O75791 330 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 VAPBO95292 243 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 PIGNO95427 931 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 AP2A1O95782 977 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 MPSTP25325 297 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 TPP2P29144 1249 aaPredicted RBP11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 CD97P48960 835 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 MPP3Q13368 585 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 ZBED5Q49AG3 693 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 PM20D1Q6GTS8 502 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 PPP4R4Q6NUP7 873 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 KLHL35Q6PF15 583 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 CHSY3Q70JA7 882 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 CMC1Q7Z7K0 106 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 AMIGO2Q86SJ2 522 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 SCD5Q86SK9 330 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 MON1AQ86VX9 555 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 NPAS3Q8IXF0 933 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 AFAP1L2Q8N4X5 818 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 MFSD2AQ8NA29 543 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 ZBTB8BQ8NAP8 495 aaPredicted RBP11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 TTC16Q8NEE8 873 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 PDZD8Q8NEN9 1154 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 CEP70Q8NHQ1 597 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 STYXQ8WUJ0 223 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 PBXIP1Q96AQ6 731 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 SGF29Q96ES7 293 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 P2RY11Q96G91 374 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 AGAP3Q96P47 875 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 ASB2Q96Q27 587 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 GPR22Q99680 433 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 SLC46A2Q9BY10 475 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 NMUR1Q9HB89 426 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 TLR8Q9NR97 1041 aaKnown RBP11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 OSER1Q9NX31 292 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 RRN3Q9NYV6 651 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 SLC17A6Q9P2U8 582 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 TLK1Q9UKI8 766 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 NUDT5Q9UKK9 219 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 ITGB1BP2Q9UKP3 347 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 FZD10Q9ULW2 581 aa11.46□□□□□ -0.57
TSPAN1-201ENST00000372003 ZCWPW2A0A1B0GU75 182 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 YJEFN3A6XGL0 299 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 C2CD4DB7Z1M9 353 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 TRIM24O15164 1050 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 NCAM2O15394 837 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 PSMD3O43242 534 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 MAP3K6O95382 1288 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 STAMBPO95630 424 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 HNRNPCP07910 306 aaKnown RBP eCLIP11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 BMP2P12643 396 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 HMOX2P30519 316 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 GRIA4P48058 902 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 PPP3CCP48454 512 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 SCNN1BP51168 640 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 KPNA2P52292 529 aaKnown RBP11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 DAOAP59103 153 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 DNAJB13P59910 316 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 PSME3P61289 254 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 SLC12A1Q13621 1099 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 SQLEQ14534 574 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 ARL13AQ5H913 290 aaPredicted RBP11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 KRT80Q6KB66 452 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 HFE2Q6ZVN8 426 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 OTOP3Q7RTS5 596 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 PELI3Q8N2H9 469 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 GALNT4Q8N4A0 578 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 TMEM151AQ8N4L1 468 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 ARL14EPQ8N8R7 260 aaPredicted RBP11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 EDEM1Q92611 657 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 FAM149B1Q96BN6 582 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 ZNF669Q96BR6 464 aaPredicted RBP11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 CNDP2Q96KP4 475 aaKnown RBP11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 RANBP9Q96S59 729 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 C1QTNF1Q9BXJ1 281 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 NACA2Q9H009 215 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 SMG9Q9H0W8 520 aaKnown RBP11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 TASP1Q9H6P5 420 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 WDR55Q9H6Y2 383 aaPredicted RBP11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 CCSER2Q9H7U1 834 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 COQ10BQ9H8M1 238 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 PALMDQ9NP74 551 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 OLAHQ9NV23 265 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 ARMC1Q9NVT9 282 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 ZNF358Q9NW07 568 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 RHBDL2Q9NX52 303 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 VANGL2Q9ULK5 521 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 PCDHGB4Q9UN71 923 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 SH3BP1Q9Y3L3 701 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 PCDHGB5Q9Y5G0 923 aa11.46□□□□□ -0.58
TSPAN1-201ENST00000372003 HEATR9A2RTY3 570 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms