RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 PIPSLA2A3N6 862 aa13.47□□□□□ -0.25
PREX1-201ENST00000371941 CABYRO75952 493 aa13.47□□□□□ -0.25
PREX1-201ENST00000371941 TRAF3Q13114 568 aa13.47□□□□□ -0.25
PREX1-201ENST00000371941 ITGA7Q13683 1181 aa13.47□□□□□ -0.25
PREX1-201ENST00000371941 VANGL1Q8TAA9 524 aaPredicted RBP13.47□□□□□ -0.25
PREX1-201ENST00000371941 ACTRT2Q8TDY3 377 aa13.47□□□□□ -0.25
PREX1-201ENST00000371941 BRD9Q9H8M2 597 aa13.47□□□□□ -0.25
PREX1-201ENST00000371941 HOXA2O43364 376 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 OR4F21O95013 312 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 LIMK2P53671 638 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 SPIBQ01892 262 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 CHADLQ6NUI6 762 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 CASP12Q6UXS9 341 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 HIPK1Q86Z02 1210 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 MARCH7Q9H992 704 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 NWD2Q9ULI1 1742 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
PREX1-201ENST00000371941 LYNP07948 512 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 TAS2R39P59534 338 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 MAD2L1Q13257 205 aaPredicted RBP13.46□□□□□ -0.25
PREX1-201ENST00000371941 TSNQ15631 228 aaKnown RBP13.46□□□□□ -0.25
PREX1-201ENST00000371941 INAQ16352 499 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 TIGD5Q53EQ6 642 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 CYP4Z1Q86W10 505 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 TEKT5Q96M29 485 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 WRAP53Q9BUR4 548 aaKnown RBP13.46□□□□□ -0.25
PREX1-201ENST00000371941 ARHGEF3Q9NR81 526 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 C5orf60A6NFR6 353 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 MTPNP58546 118 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 ZNF549Q6P9A3 640 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 ABRAXAS1Q6UWZ7 409 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 CLIP4Q8N3C7 705 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 NKAPQ8N5F7 415 aaKnown RBP13.46□□□□□ -0.25
PREX1-201ENST00000371941 PNPLA1Q8N8W4 532 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 ST6GALNAC4Q9H4F1 302 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 NAV1Q8NEY1 1877 aa13.46□□□□□ -0.25
PREX1-201ENST00000371941 PDLIM1O00151 329 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 SAP18O00422 153 aaKnown RBP13.46□□□□□ -0.26
PREX1-201ENST00000371941 RFXANKO14593 260 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 TPST2O60704 377 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 RNASE12Q5GAN4 147 aaKnown RBP13.46□□□□□ -0.26
PREX1-201ENST00000371941 PLPP4Q5VZY2 271 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 ZNF57Q68EA5 555 aaPredicted RBP13.46□□□□□ -0.26
PREX1-201ENST00000371941 UBE2R2Q712K3 238 aaPredicted RBP13.46□□□□□ -0.26
PREX1-201ENST00000371941 CPNE9Q8IYJ1 553 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 PHTF2Q8N3S3 785 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 AUTS2Q8WXX7 1259 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 DLG3Q92796 817 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 APOL4Q9BPW4 351 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 ZDHHC2Q9UIJ5 367 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 FAM220BPB1ANY3 271 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 CHRM5P08912 532 aaPredicted RBP13.46□□□□□ -0.26
PREX1-201ENST00000371941 NCF4Q15080 339 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 PRR11Q96HE9 360 aaPredicted RBP13.46□□□□□ -0.26
PREX1-201ENST00000371941 STN1Q9H668 368 aaKnown RBP13.46□□□□□ -0.26
PREX1-201ENST00000371941 COQ10BQ9H8M1 238 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 RSL24D1Q9UHA3 163 aaKnown RBP13.46□□□□□ -0.26
PREX1-201ENST00000371941 FBXW11Q9UKB1 542 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 SAMHD1Q9Y3Z3 626 aaKnown RBP13.46□□□□□ -0.26
PREX1-201ENST00000371941 TCAF1Q9Y4C2 921 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 TLL2Q9Y6L7 1015 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.26
PREX1-201ENST00000371941 J3KR12 359 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 TBX10O75333 385 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 USP46P62068 366 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 ARMC4Q5T2S8 1044 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 TRIM69Q86WT6 500 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 OR4A15Q8NGL6 344 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 APOLD1Q96LR9 279 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 CDK5RAP1Q96SZ6 601 aaKnown RBP13.45□□□□□ -0.26
PREX1-201ENST00000371941 RSPH9Q9H1X1 276 aaPredicted RBP13.45□□□□□ -0.26
PREX1-201ENST00000371941 RAD21L1Q9H4I0 556 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 GIT1Q9Y2X7 761 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 GPSM3Q9Y4H4 160 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 DOT1LQ8TEK3 1739 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 MYOCOSA0A1B0GUC4 107 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 MLYCDO95822 493 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 HPCAL1P37235 193 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 TNK2Q07912 1038 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 INTS6LQ5JSJ4 861 aaKnown RBP13.45□□□□□ -0.26
PREX1-201ENST00000371941 FGD2Q7Z6J4 655 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 ING5Q8WYH8 240 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 FAM53CQ9NYF3 392 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 IKZF3Q9UKT9 509 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 COL14A1Q05707 1796 aaKnown RBP13.45□□□□□ -0.26
PREX1-201ENST00000371941 TOR1BO14657 336 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 WBP4O75554 376 aaKnown RBP13.45□□□□□ -0.26
PREX1-201ENST00000371941 POU2F1P14859 743 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 TSHRP16473 764 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 PITX1P78337 314 aaPredicted RBP13.45□□□□□ -0.26
PREX1-201ENST00000371941 PTP4A2Q12974 167 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 OGFOD2Q6N063 350 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 CLEC20AQ6ZU45 233 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 ADHFE1Q8IWW8 467 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 CBR4Q8N4T8 237 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 PTCD3Q96EY7 689 aaKnown RBP13.45□□□□□ -0.26
PREX1-201ENST00000371941 PANX3Q96QZ0 392 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 COQ4Q9Y3A0 265 aa13.45□□□□□ -0.26
PREX1-201ENST00000371941 PSAT1Q9Y617 370 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms