RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 HMCESQ96FZ2 354 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 SLC25A51Q9H1U9 297 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 RSPH9Q9H1X1 276 aaPredicted RBP19.63■□□□□ 0.73
LMO4-202ENST00000370544 FZD8Q9H461 694 aa19.63■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3DA0A087WVF3 549 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3IA0A087WXS9 549 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3EA0A087X179 549 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3KA0A087X1G2 549 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3FA6NER0 549 aaPredicted RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3LB9A6J9 549 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3HP0C7X1 549 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TIMM50Q3ZCQ8 353 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3GQ6DHY5 549 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3CQ6IPX1 549 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 ADGRD1Q6QNK2 874 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 RNF44Q7L0R7 432 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TBC1D3Q8IZP1 549 aaPredicted RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 PPP1R14AQ96A00 147 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 NXNL1Q96CM4 212 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 FAM192AQ9GZU8 254 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 SGK2Q9HBY8 427 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 CLN6Q9NWW5 311 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 ZNF214Q9UL59 606 aaPredicted RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 PNMA8CA0A1B0GUJ8 204 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 KCNU1A8MYU2 1149 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 APODP05090 189 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 MAPKAPK2P49137 400 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 TIGD2Q4W5G0 525 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 ABRAXAS1Q6UWZ7 409 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 CRELD2Q6UXH1 353 aaPredicted RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 ZNF384Q8TF68 577 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 IMP3Q9NV31 184 aaKnown RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 ATG13O75143 517 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 HLA-DQA2P01906 255 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 SLC7A2P52569 658 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 DAOAP59103 153 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 PDK3Q15120 406 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 VARS2Q5ST30 1063 aaKnown RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 DNAJC1Q96KC8 554 aaKnown RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 REXO4Q9GZR2 422 aaKnown RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 WDR55Q9H6Y2 383 aaPredicted RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 A0A0J9YYE9 177 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 MYBPHLA2RUH7 354 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 QPCTQ16769 361 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 SPANXN2Q5MJ10 180 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 NTPCRQ9BSD7 190 aaKnown RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 ACAT2Q9BWD1 397 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 FAM180AQ6UWF9 173 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 FAXDC2Q96IV6 333 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 SH3GL2Q99962 352 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 SIX2Q9NPC8 291 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 GTF2IRD1Q9UHL9 959 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 ZNF490Q9ULM2 529 aaPredicted RBP19.62■□□□□ 0.73
LMO4-202ENST00000370544 SLC9A8Q9Y2E8 581 aa19.62■□□□□ 0.73
LMO4-202ENST00000370544 A0A1B0GVM2 712 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 CCDC189A1A4V9 331 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 TCAF2A6NFQ2 919 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 SNAP91O60641 907 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 STBD1O95210 358 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 CCNDBP1O95273 360 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 MPP1Q00013 466 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 SPIBQ01892 262 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 MAPK11Q15759 364 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 BROXQ5VW32 411 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 GK5Q6ZS86 529 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 DSELQ8IZU8 1212 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 SPATA22Q8NHS9 363 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 SMG7Q92540 1137 aaKnown RBP19.61■□□□□ 0.73
LMO4-202ENST00000370544 SLC47A1Q96FL8 570 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 TCF12Q99081 682 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 ZNF180Q9UJW8 692 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.61■□□□□ 0.73
LMO4-202ENST00000370544 PDE9AO76083 593 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 ALOX12P18054 663 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 PPIBP23284 216 aaKnown RBP19.61■□□□□ 0.73
LMO4-202ENST00000370544 NDST2P52849 883 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 TOMM20Q15388 145 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 SLC1A5Q15758 541 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 RTL3Q8N8U3 475 aaKnown RBP19.61■□□□□ 0.73
LMO4-202ENST00000370544 GPR21Q99679 349 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 ARL8BQ9NVJ2 186 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 ZNF780BQ9Y6R6 833 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 FGBP02675 491 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 Q96MT0 163 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 MAGEH1Q9H213 219 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 N6AMT1Q9Y5N5 214 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 SNX10Q9Y5X0 201 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 KPNA4O00629 521 aaPredicted RBP19.61■□□□□ 0.73
LMO4-202ENST00000370544 VNN1O95497 513 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 KELP23276 732 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 MTAPQ13126 283 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 PPM1JQ5JR12 505 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 ZNF618Q5T7W0 954 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 CHSY3Q70JA7 882 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 C17orf64Q86WR6 236 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 WRAP73Q9P2S5 460 aaPredicted RBP19.61■□□□□ 0.73
LMO4-202ENST00000370544 EGFL7Q9UHF1 273 aa19.61■□□□□ 0.73
LMO4-202ENST00000370544 ATXN2Q99700 1313 aaKnown RBP19.61■□□□□ 0.73
LMO4-202ENST00000370544 DHX15O43143 795 aaKnown RBP19.6■□□□□ 0.73
LMO4-202ENST00000370544 NFATC1O95644 943 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms