RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 LRRC58Q96CX6 371 aa17.41■□□□□ 0.38
CHTOP-203ENST00000368690 ASB2Q96Q27 587 aa17.41■□□□□ 0.38
CHTOP-203ENST00000368690 CGREF1Q99674 301 aa17.41■□□□□ 0.38
CHTOP-203ENST00000368690 BEGAINQ9BUH8 593 aa17.41■□□□□ 0.38
CHTOP-203ENST00000368690 SPATA7Q9P0W8 599 aa17.41■□□□□ 0.38
CHTOP-203ENST00000368690 EGFL7Q9UHF1 273 aa17.41■□□□□ 0.38
CHTOP-203ENST00000368690 NR5A2O00482 541 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 TPST1O60507 370 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 SNAP29O95721 258 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 APLP1P51693 650 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 OCA2Q04671 838 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 CSHL1Q14406 222 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 SKIV2LQ15477 1246 aaKnown RBP17.4■□□□□ 0.38
CHTOP-203ENST00000368690 UGT3A2Q3SY77 523 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 ZNF618Q5T7W0 954 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 AGAP7PQ5VUJ5 663 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 KIAA0930Q6ICG6 404 aaPredicted RBP17.4■□□□□ 0.38
CHTOP-203ENST00000368690 CLYBLQ8N0X4 340 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 PARP8Q8N3A8 854 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 TMCO5AQ8N6Q1 288 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 MAGEE2Q8TD90 523 aaPredicted RBP17.4■□□□□ 0.38
CHTOP-203ENST00000368690 STARD8Q92502 1023 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 BCL7BQ9BQE9 202 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 BDH2Q9BUT1 245 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 TYW5A2RUC4 315 aaKnown RBP17.4■□□□□ 0.38
CHTOP-203ENST00000368690 C16orf96A6NNT2 1141 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 S100A1P23297 94 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 MRPL19P49406 292 aaKnown RBP17.4■□□□□ 0.38
CHTOP-203ENST00000368690 MLLT10P55197 1068 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 GABARAPL2P60520 117 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 PITX1P78337 314 aaPredicted RBP17.4■□□□□ 0.38
CHTOP-203ENST00000368690 NFKB2Q00653 900 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 NEK10Q6ZWH5 1172 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 NPWQ8N729 165 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 TSPAN17Q96FV3 270 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 VMP1Q96GC9 406 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 LRCH3Q96II8 777 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 BTN2A3PQ96KV6 586 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 CSF3RQ99062 836 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 TBL1YQ9BQ87 522 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 LHPPQ9H008 270 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 CYP4F12Q9HCS2 524 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 PIGVQ9NUD9 493 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 GJD2Q9UKL4 321 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 FBXO5Q9UKT4 447 aa17.4■□□□□ 0.38
CHTOP-203ENST00000368690 A0A087WZ62 844 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 FAM72CH0Y354 149 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 FGF4P08620 206 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 CAPN3P20807 821 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 IDUAP35475 653 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 SLC26A3P40879 764 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 LEPRP48357 1165 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 CLCN5P51795 746 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 FXNQ16595 210 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 KIF19Q2TAC6 998 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 FAM72AQ5TYM5 149 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 FAM72DQ6L9T8 149 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 FAM72BQ86X60 149 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 HDAC2Q92769 488 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 EMID1Q96A84 441 aaPredicted RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 TMEM125Q96AQ2 219 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 FKBP10Q96AY3 582 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 RDH12Q96NR8 316 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 PPP1R2P1Q96PQ5 205 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 LPIN3Q9BQK8 851 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 FDXACB1Q9BRP7 624 aaPredicted RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 AKTIPQ9H8T0 292 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 AKIP1Q9NQ31 210 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 CHST12Q9NRB3 414 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 SDR39U1Q9NRG7 319 aaPredicted RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 TREX1Q9NSU2 369 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 TSC22D4Q9Y3Q8 395 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 UBFD1O14562 309 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 ANXA9O76027 345 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 MMP3P08254 477 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 EEF1B2P24534 225 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 OPRL1P41146 370 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 YAP1P46937 504 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 EEFSECP57772 596 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 HTRA3P83110 453 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 ADIGQ0VDE8 80 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 ZBTB6Q15916 424 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 CRY1Q16526 586 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 ZNF484Q5JVG2 852 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 ESRP1Q6NXG1 681 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 PIGZQ86VD9 579 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 DCP1BQ8IZD4 617 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 LINC01465Q8N7H1 131 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 KCTD13Q8WZ19 329 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 RMI1Q9H9A7 625 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 FBRSL1Q9HCM7 1045 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 HPS4Q9NQG7 708 aa17.39■□□□□ 0.37
CHTOP-203ENST00000368690 ZFC3H1O60293 1989 aaKnown RBP17.39■□□□□ 0.37
CHTOP-203ENST00000368690 SHROOM3Q8TF72 1996 aa17.38■□□□□ 0.37
CHTOP-203ENST00000368690 H0Y858 1186 aa17.38■□□□□ 0.37
CHTOP-203ENST00000368690 UBXN8O00124 270 aa17.38■□□□□ 0.37
CHTOP-203ENST00000368690 INPP4BO15327 924 aa17.38■□□□□ 0.37
CHTOP-203ENST00000368690 SYNCRIPO60506 623 aaKnown RBP17.38■□□□□ 0.37
CHTOP-203ENST00000368690 CRHBPP24387 322 aa17.38■□□□□ 0.37
CHTOP-203ENST00000368690 EEF1DP29692 281 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms