RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 NOD2Q9HC29 1040 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 ETNK2Q9NVF9 386 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 TAAR2Q9P1P5 351 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 CD84Q9UIB8 345 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 MYO6Q9UM54 1294 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 PHTF1Q9UMS5 762 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 SUFUQ9UMX1 484 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 SCINQ9Y6U3 715 aa10.33□□□□□ -0.76
CLRN3-201ENST00000368671 FASNP49327 2511 aaKnown RBP10.33□□□□□ -0.76
CLRN3-201ENST00000368671 A0A0U1RQS6 177 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 NPIPB15A6NHN6 443 aaPredicted RBP10.32□□□□□ -0.76
CLRN3-201ENST00000368671 DDX3XO00571 662 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLRN3-201ENST00000368671 ZW10O43264 779 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 PEX11BO96011 259 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 FAM87AP0C7U9 286 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 TCF4P15884 667 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 WT1P19544 449 aaPredicted RBP10.32□□□□□ -0.76
CLRN3-201ENST00000368671 NFKBIAP25963 317 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 IL1R2P27930 398 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 GPR1P46091 355 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 PPM1FP49593 454 aaPredicted RBP10.32□□□□□ -0.76
CLRN3-201ENST00000368671 CYP4F2P78329 520 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 KLHL30Q0D2K2 578 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 TMEM164Q5U3C3 297 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 NKAIN2Q5VXU1 208 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 E4F1Q66K89 784 aaPredicted RBP10.32□□□□□ -0.76
CLRN3-201ENST00000368671 ZNF574Q6ZN55 896 aaPredicted RBP10.32□□□□□ -0.76
CLRN3-201ENST00000368671 Q6ZVL8 140 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 TSPAN33Q86UF1 283 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 ATPAF2Q8N5M1 289 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 NSMCE1Q8WV22 266 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 CCDC74BQ96LY2 380 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 GBP4Q96PP9 640 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 MGME1Q9BQP7 344 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 MRPL47Q9HD33 250 aaKnown RBP10.32□□□□□ -0.76
CLRN3-201ENST00000368671 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLRN3-201ENST00000368671 TRNAU1APQ9NX07 287 aaKnown RBP10.32□□□□□ -0.76
CLRN3-201ENST00000368671 KCTD5Q9NXV2 234 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 PLEKHM1Q9Y4G2 1056 aa10.32□□□□□ -0.76
CLRN3-201ENST00000368671 IGHV5-10-1A0A0J9YXX1 117 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 A0A1W2PQC6 194 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 PSMD11O00231 422 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 LCE2BO14633 110 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 MAFKO60675 156 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 PGLSO95336 258 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 WISP1O95388 367 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ITGB2P05107 769 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 IVLP07476 585 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 RARAP10276 462 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 GZMAP12544 262 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 SKILP12757 684 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 MPSTP25325 297 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 CD82P27701 267 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 CD1CP29017 333 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 PCK1P35558 622 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ADCY8P40145 1251 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ACTR1BP42025 376 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 MMP13P45452 471 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ACTR1AP61163 376 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 SH3BP2P78314 561 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 CTBSQ01459 385 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 TYRO3Q06418 890 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ITKQ08881 620 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 NR1D2Q14995 579 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 DPYSL2Q16555 572 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ANO6Q4KMQ2 910 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 FILIP1LQ4L180 1135 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ARMC12Q5T9G4 340 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 MARC1Q5VT66 337 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 RFLNAQ6ZTI6 216 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 USP45Q70EL2 814 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 MARK2Q7KZI7 788 aaKnown RBP10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ZNF438Q7Z4V0 828 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 POLNQ7Z5Q5 900 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 C17orf82Q86X59 251 aaPredicted RBP10.31□□□□□ -0.76
CLRN3-201ENST00000368671 DTX1Q86Y01 620 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 NAGSQ8N159 534 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLRN3-201ENST00000368671 PMEPA1Q969W9 287 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 TRIM11Q96F44 468 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 CSPG4P5Q96PW8 444 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 SMIM14Q96QK8 99 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 OR2M4Q96R27 311 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 CDH19Q9H159 772 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 NT5MQ9NPB1 228 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 SLC17A4Q9Y2C5 497 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 TMEM98Q9Y2Y6 226 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 ST14Q9Y5Y6 855 aa10.31□□□□□ -0.76
CLRN3-201ENST00000368671 TRBV23OR9-2A0A075B6M9 112 aa10.3□□□□□ -0.76
CLRN3-201ENST00000368671 GOLGA6L22H0YM25 854 aa10.3□□□□□ -0.76
CLRN3-201ENST00000368671 STMND1H3BQB6 276 aa10.3□□□□□ -0.76
CLRN3-201ENST00000368671 HGSO14964 777 aaPredicted RBP10.3□□□□□ -0.76
CLRN3-201ENST00000368671 PPM1DO15297 605 aa10.3□□□□□ -0.76
CLRN3-201ENST00000368671 PDHA1P08559 390 aa10.3□□□□□ -0.76
CLRN3-201ENST00000368671 MYBL1P10243 752 aa10.3□□□□□ -0.76
CLRN3-201ENST00000368671 FGF3P11487 239 aaPredicted RBP10.3□□□□□ -0.76
CLRN3-201ENST00000368671 SERPINB6P35237 376 aa10.3□□□□□ -0.76
CLRN3-201ENST00000368671 PRKCIP41743 596 aa10.3□□□□□ -0.76
CLRN3-201ENST00000368671 ATP1A2P50993 1020 aa10.3□□□□□ -0.76
CLRN3-201ENST00000368671 CDH6P55285 790 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms