RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CD300AQ9UGN4 299 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 COA3Q9Y2R0 106 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 NAALAD2Q9Y3Q0 740 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RWDD3Q9Y3V2 267 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SALL3Q9BXA9 1300 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ZNF236Q9UL36 1845 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 KIAA1217Q5T5P2 1943 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ATMQ13315 3056 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 IQANK1A0A1B0GTG1 560 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 A0A1W2PQ09 198 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 FAM234BA2RU67 622 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CCDC154A6NI56 674 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 GLOD5A6NK44 160 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 C4orf47A7E2U8 309 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 WNT9AO14904 365 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PIP5K1BO14986 540 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SRGAP3O43295 1099 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 HTRA2O43464 458 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ENTPD3O75355 529 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CRTAPO75718 401 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ACTL6BO94805 426 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 LUC7L3O95232 432 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ECDO95905 644 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 FGF4P08620 206 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 KRT3P12035 628 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RARGP13631 454 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 LCP1P13796 627 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ANXA8P13928 327 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 HIBADHP31937 336 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 HNF1BP35680 557 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 BMPR1AP36894 532 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MDH1P40925 334 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 BCL6P41182 706 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CSRP3P50461 194 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PRKAA2P54646 552 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ERVFRD-1P60508 538 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RAC3P60763 192 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 STX1BP61266 288 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 UBE2IP63279 158 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CSNK2BP67870 215 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PRAMEP78395 509 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ABATP80404 500 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 EXOSC9Q06265 439 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PPIDQ08752 370 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 TMEM62Q0P6H9 643 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 DNAJC3Q13217 504 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 TDGQ13569 410 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 TRA2AQ13595 282 aaKnown RBP eCLIP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 DDX39BQ13838 428 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 COTL1Q14019 142 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CCDC142Q17RM4 750 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 HS1BP3Q53T59 392 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RBM20Q5T481 1227 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 STXBP5Q5T5C0 1151 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 C1orf185Q5T7R7 199 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ATAD3BQ5T9A4 648 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ANXA8L1Q5VT79 327 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 BICRALQ6AI39 1079 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ANKRD54Q6NXT1 300 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 NEK5Q6P3R8 708 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 KCNT2Q6UVM3 1135 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ATG14Q6ZNE5 492 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ZNF600Q6ZNG1 722 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 RBM43Q6ZSC3 357 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 DNAAF5Q86Y56 855 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 C12orf56Q8IXR9 622 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ZZZ3Q8IYH5 903 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SYCP3Q8IZU3 236 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 CARFQ8N187 725 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 Q8N1Y9 231 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ZCCHC7Q8N3Z6 543 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ZNF321PQ8N8H1 164 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SYT2Q8N9I0 419 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 DNAAF3Q8N9W5 541 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 NFKBIDQ8NI38 313 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 DDI1Q8WTU0 396 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 LIN37Q96GY3 246 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 NLRP4Q96MN2 994 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC2A13Q96QE2 648 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 GAL3ST4Q96RP7 486 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PKP4Q99569 1192 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 C11orf84Q9BUA3 381 aaPredicted RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 HEMGNQ9BXL5 484 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PUS3Q9BZE2 481 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC5A7Q9GZV3 580 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 VPS16Q9H269 839 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 ARRDC1-AS1Q9H2J1 176 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 PABPC3Q9H361 631 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 TLE6Q9H808 572 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 LRRC40Q9H9A6 602 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MBNL1Q9NR56 388 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 GJB4Q9NTQ9 266 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 EHD3Q9NZN3 535 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 MARCH2Q9P0N8 246 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 AFF4Q9UHB7 1163 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 IL17BQ9UHF5 180 aa3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 IPO11Q9UI26 975 aaKnown RBP3.56□□□□□ -1.84
ECHDC1-205ENST00000368295 SLC8A2Q9UPR5 921 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms